Deciphering the molecular dynamics of complex proteins - Science Daily

		BioNMR > NMR community > Online News
Deciphering the molecular dynamics of complex proteins - Science Daily

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-23-2023, 10:11 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,198

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Deciphering the molecular dynamics of complex proteins - Science Daily

Deciphering the molecular dynamics of complex proteins - Science Daily

Deciphering the molecular dynamics of complex proteins Science Daily Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
A sharper image for proteins - Science Daily A sharper image for proteins Science Daily A sharper image for proteins - Science Daily More...	nmrlearner	Online News	0	04-29-2022 07:58 AM
New machine learning method to analyze complex scientific data of proteins: Method allows faster and more accurate data analysis from NMR spectrometers - Science Daily New machine learning method to analyze complex scientific data of proteins: Method allows faster and more accurate data analysis from NMR spectrometers - Science Daily New machine learning method to analyze complex scientific data of proteins: Method allows faster and more accurate data analysis from NMR spectrometers Science Daily Read here	nmrlearner	Online News	0	09-22-2021 12:49 PM
Dynamics of silk proteins are key to outstanding stability of spider silk as biomaterial: Interdisciplinary study clarifies role of protein dynamics mediated by the amino acid methionine - Science Daily Dynamics of silk proteins are key to outstanding stability of spider silk as biomaterial: Interdisciplinary study clarifies role of protein dynamics mediated by the amino acid methionine - Science Daily Dynamics of silk proteins are key to outstanding stability of spider silk as biomaterial: Interdisciplinary study clarifies role of protein dynamics mediated by the amino acid methionine Science Daily Read here	nmrlearner	Online News	0	02-29-2020 09:52 PM
Dynamics of crucial immune system proteins - Science Daily Dynamics of crucial immune system proteins - Science Daily Dynamics of crucial immune system proteins Science Daily Read here	nmrlearner	Online News	0	02-29-2020 09:52 PM
Enhanced NMR reveals chemical structures in a fraction of the time: Technique could yield insights into complex proteins involved in Alzheimer's and other diseases - Science Daily Enhanced NMR reveals chemical structures in a fraction of the time: Technique could yield insights into complex proteins involved in Alzheimer's and other diseases Science DailyResearchers have developed a way to dramatically enhance the sensitivity of nuclear magnetic resonance spectroscopy (NMR), a technique used to study the ... Enhanced NMR reveals chemical structures in a fraction of the time: Technique could yield insights into complex proteins involved in Alzheimer's and other diseases - Science Daily More...	nmrlearner	Online News	0	04-03-2019 01:27 PM
Revealing the role of the mysterious small proteins: Classifying proteins with less than 100 amino acids - Science Daily Revealing the role of the mysterious small proteins: Classifying proteins with less than 100 amino acids - Science Daily Revealing the role of the mysterious small proteins: Classifying proteins with less than 100 amino acids Science DailyInvestigators develop a technique to identify and classify proteins with less than 100 amino acids. These types of proteins account for only 16 percent of a ... Read here	nmrlearner	Online News	0	03-25-2019 08:37 PM
Molecular virologist fights influenza at the molecular level: A study of how experimental inhibitors bind a key flu protein may guide novel antiviral compounds - Science Daily Molecular virologist fights influenza at the molecular level: A study of how experimental inhibitors bind a key flu protein may guide novel antiviral compounds - Science Daily Molecular virologist fights influenza at the molecular level: A study of how experimental inhibitors bind a key flu protein may guide novel antiviral compounds Science DailyIn research to improve influenza therapies against H7N9 and other influenza strains, researchers have detailed the binding site and mechanism of inhibition for ... Read here	nmrlearner	Online News	0	01-07-2019 05:49 AM
Discovery of molecular protection linked to a degenerative neuromuscular disease - Science Daily http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcTbyXrfsvXVDX159YBmcQiWKi2Yn_SrPbI-1wqdNtcDmk_C5s8k8MvllU8jEN-bJZ0cEbTSzir6 Science Daily <img alt="" height="1" width="1"> Discovery of molecular protection linked to a degenerative neuromuscular disease Science Daily Thanks to access to one of the main Nuclear Magnetic Resonance facilities in Europe, located at the University of Florence, for the first time the scientists have studied the protein in a test tube. They have observed that right next to the glutamine ... Discovery of molecular protection linked to a...	nmrlearner	Online News	0	06-12-2016 02:35 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off