Chemists unveil the structure of an influenza B protein - MIT News

		BioNMR > NMR community > Online News
Chemists unveil the structure of an influenza B protein - MIT News

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

02-29-2020, 09:52 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,191

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Chemists unveil the structure of an influenza B protein - MIT News

Chemists unveil the structure of an influenza B protein - MIT News

Chemists unveil the structure of an influenza B protein MIT News Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein - News-Medical.net http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcTyM1uXTIaIw5q1INc3zkifPECmN3ZbTF8KFbDsA_fbY3BMFAuOMi8jvzcjz3gft3z24W0TdB4a News-Medical.net <img alt="" height="1" width="1"> Researchers use magic-angle-spinning NMR to unveil structure of CAP-Gly protein News-Medical.net The research team used magic-angle-spinning nuclear magnetic resonance spectrometry (NMR) in the Department of Chemistry and Biochemistry at UD to unveil the structure of the CAP-Gly protein assembled on polymerized microtubules. The CAP-Gly ... Research team finds that protein motions regulate HIV...	nmrlearner	Online News	0	11-26-2015 12:22 PM
[NMR paper] Fecal and urinary NMR-based metabolomics unveil an aging signature in mice. Fecal and urinary NMR-based metabolomics unveil an aging signature in mice. Related Articles Fecal and urinary NMR-based metabolomics unveil an aging signature in mice. Exp Gerontol. 2013 Oct 29; Authors: Calvani R, Brasili E, Praticò G, Capuani G, Tomassini A, Marini F, Sciubba F, Finamore A, Roselli M, Marzetti E, Miccheli A Abstract BACKGROUND: Aging is characterized by derangements in multiple metabolic pathways that progressively constrict the homeostatic reserve (homeostenosis). The signature of metabolic alterations that accompany...	nmrlearner	Journal club	0	11-05-2013 06:53 PM
Chemists develop reversible method of tagging proteins - Eureka! Science News Chemists develop reversible method of tagging proteins - Eureka! Science News <img alt="" height="1" width="1" /> Chemists develop reversible method of tagging proteins Eureka! Science News Subsequent reattachment of a fatty acid analogue reconstituted the protein complex to its natural state. By repeating the process again and again, while examining the molecular changes in the fatty acid with nuclear magnetic spectroscopy, or NMR ... and more » Read here	nmrlearner	Online News	0	09-17-2012 02:05 AM
[NMR tweet] By studying the peaks of nuclear magnetic resonance spectra, chemists can determine the structure of many compounds. By studying the peaks of nuclear magnetic resonance spectra, chemists can determine the structure of many compounds. Published by Sin_ichi (M Nurrohman Sidiq) on 2010-12-01T08:30:06Z Source: Twitter	nmrlearner	Twitter NMR	0	12-01-2010 08:31 AM
[NMR paper] NMR structure of HI0004, a putative essential gene product from Haemophilus influenza NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae, and comparison with the X-ray structure of an Aquifex aeolicus homolog. Related Articles NMR structure of HI0004, a putative essential gene product from Haemophilus influenzae, and comparison with the X-ray structure of an Aquifex aeolicus homolog. Protein Sci. 2005 Feb;14(2):424-30 Authors: Yeh DC, Parsons LM, Parsons JF, Liu F, Eisenstein E, Orban J The solution structure of the 154-residue conserved hypothetical protein HI0004 has been determined using...	nmrlearner	Journal club	0	11-24-2010 11:14 PM
[NMR paper] Structure, dynamics and function of the outer membrane protein A (OmpA) and influenza Structure, dynamics and function of the outer membrane protein A (OmpA) and influenza hemagglutinin fusion domain in detergent micelles by solution NMR. Related Articles Structure, dynamics and function of the outer membrane protein A (OmpA) and influenza hemagglutinin fusion domain in detergent micelles by solution NMR. FEBS Lett. 2003 Nov 27;555(1):139-43 Authors: Tamm LK, Abildgaard F, Arora A, Blad H, Bushweller JH Recent progress from our laboratories to determine structures of small membrane proteins (up to 20 kDa) in detergent micelles...	nmrlearner	Journal club	0	11-24-2010 09:16 PM
Solution NMR structure of the V27A drug resistant mutant of influenza A M2 channel. Solution NMR structure of the V27A drug resistant mutant of influenza A M2 channel. Solution NMR structure of the V27A drug resistant mutant of influenza A M2 channel. Biochem Biophys Res Commun. 2010 Sep 9; Authors: Pielak RM, Chou JJ The M2 protein of influenza A virus forms a proton-selective channel that is required for viral replication; it is also the target of the anti-influenza drugs, amantadine and rimantadine. Widespread drug-resistant mutants, however, has greatly compromised the effectiveness of these drugs. Here, we report the...	nmrlearner	Journal club	0	09-14-2010 02:03 PM
[NMR paper] Structure of influenza virus panhandle RNA studied by NMR spectroscopy and molecular Structure of influenza virus panhandle RNA studied by NMR spectroscopy and molecular modeling. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--highwire.stanford.edu-icons-externalservices-pubmed-custom-oxfordjournals_final_free.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles Structure of influenza virus panhandle RNA studied by NMR spectroscopy and molecular modeling. Nucleic Acids Res. 1999 Mar 1;27(5):1392-7 Authors: Cheong HK, Cheong C, Lee YS, Seong BL,...	nmrlearner	Journal club	0	08-21-2010 04:03 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off