BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from other NMR forums
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 05-20-2014, 11:10 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,188
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Buffer systems for protein pH titrations

Buffer systems for protein pH titrations

Hi All,

I am trying to design a 1D 31P pH titration experiment for a protein. I have been trying to identify a good buffer system that covers a broad pH range. The protein is very stable so I can push the pH beyond the pH 3.6-9 range that you get with acetate/Tris-acetate. I've been searching through the literature, but I can't seem to find an alternative to the Tris-acetate buffer system (though I may be making my google-fu too narrow). Is anyone aware of a different buffer system for pH titrations of protein samples?

Thanks for your time.



Check if somebody has answered this question on NMRWiki QA forum
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] What's in your buffer? Solute altered millisecond motions detected by solution NMR.
What's in your buffer? Solute altered millisecond motions detected by solution NMR. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-pubmed-acspubs.jpg Related Articles What's in your buffer? Solute altered millisecond motions detected by solution NMR. Biochemistry. 2013 Sep 17;52(37):6548-58 Authors: Wong M, Khirich G, Loria JP Abstract To date, little work has been conducted on the relationship between solute and buffer molecules and conformational exchange motion in enzymes. This study uses...
nmrlearner Journal club 0 11-13-2013 09:22 PM
Correction to What’s in Your Buffer? SoluteAltered Millisecond Motions Detected by Solution NMR
Correction to What’s in Your Buffer? SoluteAltered Millisecond Motions Detected by Solution NMR Biochemistry DOI: 10.1021/bi401247g http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/SNG1t-6phBc More...
nmrlearner Journal club 0 09-25-2013 11:15 AM
What’s in Your Buffer? Solute Altered MillisecondMotions Detected by Solution NMR
What’s in Your Buffer? Solute Altered MillisecondMotions Detected by Solution NMR http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/bi400973e/aop/images/medium/bi-2013-00973e_0013.gif Biochemistry DOI: 10.1021/bi400973e http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/L3Z6uPM8BhA More...
nmrlearner Journal club 0 08-31-2013 06:18 AM
Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations
Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations Abstract NMR-monitored pH titration curves of proteins provide a rich source of structural and electrostatic information. Although relatively straightforward to measure, interpreting pH-dependent chemical shift changes to obtain site-specific acid dissociation constants (pK A values) is challenging. In order to analyze the biphasic titrations exhibited by the side chain 13Cγ nuclei of the nucleophilic Glu78 and general acid/base Glu172 in Bacillus circulans xylanase, we have...
nmrlearner Journal club 0 09-30-2011 08:01 PM
Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations.
Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations. Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations. J Biomol NMR. 2011 Sep;51(1-2):5-19 Authors: McIntosh LP, Naito D, Baturin SJ, Okon M, Joshi MD, Nielsen JE Abstract NMR-monitored pH titration curves of proteins provide a rich source of structural and electrostatic information. Although relatively straightforward to measure, interpreting pH-dependent chemical shift changes to...
nmrlearner Journal club 0 09-30-2011 06:00 AM
Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations.
Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations. Dissecting electrostatic interactions in Bacillus circulans xylanase through NMR-monitored pH titrations. J Biomol NMR. 2011 Sep;51(1-2):5-19 Authors: McIntosh LP, Naito D, Baturin SJ, Okon M, Joshi MD, Nielsen JE Abstract NMR-monitored pH titration curves of proteins provide a rich source of structural and electrostatic information. Although relatively straightforward to measure, interpreting pH-dependent chemical shift changes...
nmrlearner Journal club 0 09-30-2011 05:59 AM
[NMR paper] Capillary array electrophoretic NMR of proteins in biological buffer solutions.
Capillary array electrophoretic NMR of proteins in biological buffer solutions. Related Articles Capillary array electrophoretic NMR of proteins in biological buffer solutions. J Magn Reson. 1999 Dec;141(2):355-9 Authors: He Q, Liu Y, Sun H, Li E The capillary array electrophoretic NMR (CA-ENMR) was developed to study protein mixtures in biological buffer solutions of high ionic strength. By enhancing the strength of the effective electric field across the sample, the technique permits the detection of the electrophoretic motion of 1 mM...
nmrlearner Journal club 0 11-18-2010 08:31 PM
[NMR paper] Proton NMR studies of a large protein. pH, substrate titrations, and NOESY experiment
Proton NMR studies of a large protein. pH, substrate titrations, and NOESY experiments with perdeuterated yeast phosphoglycerate kinase containing histidine residues. Related Articles Proton NMR studies of a large protein. pH, substrate titrations, and NOESY experiments with perdeuterated yeast phosphoglycerate kinase containing histidine residues. J Magn Reson B. 1994 Oct;105(2):157-66 Authors: Pappu KM, Serpersu EH Fully deuterated yeast phosphoglycerate kinase (PGK) was prepared biosynthetically with only histidine side chains of normal...
nmrlearner Journal club 0 08-22-2010 03:29 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:30 AM.


Map