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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 6 of 6
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Go to first new post Transferred Overhauser DNP: A Fast, Efficient Approach for Room Temperature 13C ODNP at Moderately Low Fields and Natural Abundance #DNPNMR
From The DNP-NMR Blog: Transferred Overhauser DNP: A Fast, Efficient Approach for Room Temperature 13C ODNP at Moderately Low Fields and Natural Abundance #DNPNMR p.p1 {margin: 0.0px 0.0px 0.0px 36.0px; text-indent: -36.0px; font: 12.0px Helvetica} Dey, A., A. Banerjee, and N. Chandrakumar, Transferred Overhauser DNP: A Fast, Efficient Approach for Room Temperature 13C ODNP at Moderately Low Fields and Natural Abundance. The Journal of Physical Chemistry B, 2017. 121(29): p. 7156-7162. https://www.ncbi.nlm.nih.gov/pubmed/28658577
nmrlearner
Today 03:50 AM
by nmrlearner Go to last post
0 1 News from NMR blogs
Go to first new post Cholesterol helps flu virus escape through host cell's membrane - Phys.Org
http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcTUz_DQZKcDsEKe64jWd_xOxKtSFRoAEtDYq1HCnk1-xQQvM8o2bfrbVsr8mWaVAssJPdSmrBdQ Phys.Org <img alt="" height="1" width="1"> Cholesterol helps flu virus escape through host cell's membrane Phys.Org Using a technique called solid-state nuclear magnetic resonance (NMR) spectroscopy, the MIT team found that two cholesterol molecules bind to a flu protein called M2 to sever the viral buds from their host. The molecular configuration creates an ... and more &raquo; Cholesterol helps flu virus escape through host cell's membrane - Phys.Org
nmrlearner
Today 03:50 AM
by nmrlearner Go to last post
0 1 Online News
Go to first new post A Sweet Embrace: Control of Protein–ProteinInteractions by O-Linked ?-N-Acetylglucosamine
A Sweet Embrace: Control of Protein–ProteinInteractions by O-Linked ?-N-Acetylglucosamine http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00871/20171117/images/medium/bi-2017-00871n_0004.gif Biochemistry DOI: 10.1021/acs.biochem.7b00871 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/KcObOYnTaF8 More...
nmrlearner
Today 03:50 AM
by nmrlearner Go to last post
0 1 Journal club
Go to first new post Combining H/D Exchange Mass Spectrometry and ComputationalDocking To Derive the Structure of Protein–Protein Complexes
Combining H/D Exchange Mass Spectrometry and ComputationalDocking To Derive the Structure of Protein–Protein Complexes http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00643/20171116/images/medium/bi-2017-00643w_0002.gif Biochemistry DOI: 10.1021/acs.biochem.7b00643 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/RQv07eLEF3A More...
nmrlearner
Yesterday 02:16 PM
by nmrlearner Go to last post
0 3 Journal club
Go to first new post Using Tryptophan Mutants To Probe the Structural andFunctional Status of BsSCO, a Copper Binding, Cytochrome c Oxidase Assembly Protein from Bacillus subtilis
Using Tryptophan Mutants To Probe the Structural andFunctional Status of BsSCO, a Copper Binding, Cytochrome c Oxidase Assembly Protein from Bacillus subtilis http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b00833/20171117/images/medium/bi-2017-00833p_0009.gif Biochemistry DOI: 10.1021/acs.biochem.7b00833 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/qWXMR8IB5PE More...
nmrlearner
Yesterday 02:16 PM
by nmrlearner Go to last post
0 3 Journal club
Go to first new post Programmable RNA Binding Proteins for Imaging andTherapeutics
Programmable RNA Binding Proteins for Imaging andTherapeutics http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.7b01101/20171117/images/medium/bi-2017-01101x_0001.gif Biochemistry DOI: 10.1021/acs.biochem.7b01101 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/BmwUG1_YBPM More...
nmrlearner
Yesterday 02:16 PM
by nmrlearner Go to last post
0 4 Journal club
Showing results 1 to 6 of 6

 
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