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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 25 of 500
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Search: Posts Made By: nmrlearner
Forum: Online News Today, 09:40 AM
Replies: 0
Views: 2
Posted By nmrlearner
Accessing isotopically labeled proteins containing genetically encoded phosphoserine for NMR with optimized ... - ScienceDirect.com

Accessing isotopically labeled proteins containing genetically encoded phosphoserine for NMR with optimized ... - ScienceDirect.com

Accessing isotopically labeled proteins containing genetically...
Forum: Online News Today, 09:40 AM
Replies: 0
Views: 2
Posted By nmrlearner
Analyzing RNA Protein Complexes with Solid State NMR - AZoM

Analyzing RNA Protein Complexes with Solid State NMR - AZoM

Analyzing RNA Protein Complexes with Solid State NMR...
Forum: Online News Today, 09:40 AM
Replies: 0
Views: 2
Posted By nmrlearner
NMR techniques in drug delivery: Application to zein protein complexes - ScienceDirect.com

NMR techniques in drug delivery: Application to zein protein complexes - ScienceDirect.com

NMR techniques in drug delivery: Application to zein protein complexes...
Forum: Online News Today, 09:40 AM
Replies: 0
Views: 1
Posted By nmrlearner
Mapping the energy landscape of protein–ligand binding via linear free energy relationships determined by protein ... - ScienceDirect.com

Mapping the energy landscape of protein–ligand binding via linear free energy relationships determined by protein ... - ScienceDirect.com

Mapping the energy landscape of protein–ligand binding via...
Forum: Online News Today, 09:40 AM
Replies: 0
Views: 2
Posted By nmrlearner
In-situ measurement of 3-D protein structure inside living eukaryotic cells - Phys.org

In-situ measurement of 3-D protein structure inside living eukaryotic cells - Phys.org

In-situ measurement of 3-D protein structure inside living eukaryotic cells...
Forum: Online News Yesterday, 09:30 AM
Replies: 0
Views: 13
Posted By nmrlearner
Hydrogen exchange in peptides and proteins using NMR spectroscopy - ScienceDirect.com

Hydrogen exchange in peptides and proteins using NMR spectroscopy - ScienceDirect.com

Hydrogen exchange in peptides and proteins using NMR spectroscopy...
Forum: Journal club 04-26-2024, 05:48 PM
Replies: 0
Views: 16
Posted By nmrlearner
Proline Peptide Bond Isomerization in Ubiquitin under Folding and Denaturing Conditions by Pressure-Jump NMR

Proline Peptide Bond Isomerization in Ubiquitin under Folding and Denaturing Conditions by Pressure-Jump NMR...
Forum: Journal club 04-26-2024, 05:48 PM
Replies: 0
Views: 14
Posted By nmrlearner
NMR characterization of RNA binding property of the DEAD-box RNA helicase DDX3X and its implications for helicase activity

NMR characterization of RNA binding property of the DEAD-box RNA helicase DDX3X and its implications for helicase activity...
Forum: Journal club 04-26-2024, 05:48 PM
Replies: 0
Views: 156
Posted By nmrlearner
NMR Studies of Genomic RNA in 3' Untranslated Region Unveil Pseudoknot Structure that Initiates Viral RNA Replication in SARS-CoV-2

NMR Studies of Genomic RNA in 3' Untranslated Region Unveil Pseudoknot Structure that Initiates Viral RNA Replication in SARS-CoV-2...
Forum: Journal club 04-26-2024, 04:20 AM
Replies: 0
Views: 43
Posted By nmrlearner
NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation

NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation...
Forum: Journal club 04-25-2024, 04:20 PM
Replies: 0
Views: 45
Posted By nmrlearner
NMR methods to detect fluoride binding and transport by membrane proteins

NMR methods to detect fluoride binding and transport by membrane proteins...
Forum: Online News 04-25-2024, 04:20 PM
Replies: 0
Views: 23
Posted By nmrlearner
Global fold and backbone dynamics of the hepatitis C virus E2 glycoprotein transmembrane domain determined by NMR - ScienceDirect.com

Global fold and backbone dynamics of the hepatitis C virus E2 glycoprotein transmembrane domain determined by NMR - ScienceDirect.com

Global fold and backbone dynamics of the hepatitis C virus E2...
Forum: Journal club 04-25-2024, 04:15 AM
Replies: 0
Views: 47
Posted By nmrlearner
Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy

Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy...
Forum: Journal club 04-24-2024, 05:58 AM
Replies: 0
Views: 28
Posted By nmrlearner
NMR metabolomic modeling of age and lifespan: A multicohort analysis

NMR metabolomic modeling of age and lifespan: A multicohort analysis...
Forum: Journal club 04-24-2024, 05:58 AM
Replies: 0
Views: 24
Posted By nmrlearner
Solution NMR chemical shift assignment of apo and molybdate-bound ModA at two pHs

Solution NMR chemical shift assignment of apo and molybdate-bound ModA at two pHs...
Forum: Journal club 04-24-2024, 05:58 AM
Replies: 0
Views: 23
Posted By nmrlearner
Quantification of Residual Water in Pharmaceutical Frozen Solutions via (1)H Solid-state NMR

Quantification of Residual Water in Pharmaceutical Frozen Solutions via (1)H Solid-state NMR...
Forum: Journal club 04-24-2024, 05:58 AM
Replies: 0
Views: 23
Posted By nmrlearner
Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure

Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure...
Forum: Journal club 04-24-2024, 05:58 AM
Replies: 0
Views: 29
Posted By nmrlearner
Imaging of adeno-associated viral capsids for purposes of gene editing using CEST NMR/MRI

Imaging of adeno-associated viral capsids for purposes of gene editing using CEST NMR/MRI...
Forum: Journal club 04-24-2024, 05:58 AM
Replies: 0
Views: 81
Posted By nmrlearner
Protein Allostery Study in Cells Using NMR Spectroscopy

Protein Allostery Study in Cells Using NMR Spectroscopy...
Forum: Online News 04-22-2024, 02:18 PM
Replies: 0
Views: 48
Posted By nmrlearner
Optimal isotope labelling for NMR protein structure determinations - Nature.com

Optimal isotope labelling for NMR protein structure determinations - Nature.com

Optimal isotope labelling for NMR protein structure determinations...
Forum: Online News 04-21-2024, 07:50 AM
Replies: 0
Views: 55
Posted By nmrlearner
Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Financial Times

Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Financial Times

Bruker Introduces Novel NMR Scientific Capabilities for...
Forum: Online News 04-21-2024, 07:50 AM
Replies: 0
Views: 53
Posted By nmrlearner
Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Yahoo Finance

Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Yahoo Finance

Bruker Introduces Novel NMR Scientific Capabilities for...
Forum: Journal club 04-19-2024, 11:48 PM
Replies: 0
Views: 341
Posted By nmrlearner
Targeted Degradation of Cell-Surface Proteins via Chaperone-Mediated Autophagy by Using Peptide-Conjugated Antibodies

Targeted Degradation of Cell-Surface Proteins via Chaperone-Mediated Autophagy by Using Peptide-Conjugated Antibodies (https://onlinelibrary.wiley.com/doi/10.1002/anie.202319232?af=R)


Angewandte...
Forum: Journal club 04-18-2024, 07:01 PM
Replies: 0
Views: 121
Posted By nmrlearner
Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR

Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 60
Posted By nmrlearner
Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A low-field (1)H NMR study

Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A low-field (1)H NMR study...
Showing results 1 to 25 of 500

 
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