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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR
Showing results 1 to 6 of 6
Search took 0.00 seconds. Search: Posts Made By: daniel
Forum: Journal club 08-14-2008, 10:15 PM
Replies: 0
Views: 3,041
Posted By daniel
HIFI-C: a robust and fast method for determining NMR couplings from adaptive 3D to 2D projections

HIFI-C: a robust and fast method for determining NMR couplings from adaptive 3D to 2D projections (http://www.springerlink.com/content/w25612v3252461vu/?p=482ab0c673a94bf1a69a89721a727475&pi=5)...
Forum: Journal club 08-03-2008, 03:54 AM
Replies: 0
Views: 4,072
Posted By daniel
De novo determination of internuclear vector orientations from residual dipolar couplings measured in three independent alignment media

De novo determination of internuclear vector orientations from residual dipolar couplings measured in three independent alignment media...
Forum: Journal club 08-03-2008, 03:46 AM
Replies: 0
Views: 3,594
Posted By daniel
Density functional calculations of 15N chemical shifts in solvated dipeptides

Density functional calculations of 15N chemical shifts in solvated dipeptides (http://www.springerlink.com/content/j04l2762773536g3/?p=f1f9ed09a23747ba8b5dab4a07c87dcb&pi=1)
Ling Cai, David Fushman...
Forum: Journal club 08-03-2008, 03:38 AM
Replies: 0
Views: 3,753
Posted By daniel
Numbat: an interactive software tool for fitting Δχ-tensors to molecular coordinates using pseudocontact shifts

Numbat: an interactive software tool for fitting Δχ-tensors to molecular coordinates using pseudocontact shifts...
Forum: Journal club 08-03-2008, 03:24 AM
Replies: 0
Views: 3,540
Posted By daniel
Automated sequence-specific protein NMR assignment using the memetic algorithm MATCH

Automated sequence-specific protein NMR assignment using the memetic algorithm MATCH (http://www.springerlink.com/content/al57310618726544/?p=e2b618a694034e0e9b6c9dfb1d623014&pi=2)
Jochen Volk,...
Forum: Journal club 08-03-2008, 03:16 AM
Replies: 0
Views: 3,527
Posted By daniel
Using relaxation dispersion NMR spectroscopy to determine structures of excited, invisible protein states

Using relaxation dispersion NMR spectroscopy to determine structures of excited, invisible protein states...
Showing results 1 to 6 of 6

 
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