BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Search Forums
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 10 of 10
Search took 0.00 seconds.
Search: Threads Started By: administrator
  Thread / Thread Starter Last Post Replies Views Forum
2 Attachment(s) Go to first new post High Resolution 1H Detected 1H,13C Correlation Spectra in MAS Solid-State NMR using Deuterated Proteins with Selective 1H,2H Isotopic Labeling of Methyl Groups
High Resolution <SUP>1</SUP>H Detected <SUP>1</SUP>H,<SUP>13</SUP>C Correlation Spectra in MAS Solid-State NMR using Deuterated Proteins with Selective <SUP>1</SUP>H,<SUP>2</SUP>H Isotopic Labeling of Methyl Groups Vipin Agarwal, Anne Diehl, Nikolai Skrynnikov, and Bernd Reif J. Am. Chem. Soc.; 2006; 128(39) pp 12620 - 12621; Abstract: MAS solid-state NMR experiments applied to biological solids are still hampered by low sensitivity and resolution. In this work, we employ a deuteration scheme in which individual methyl groups are selectively protonated. This labeling scheme...
administrator
08-05-2009 03:21 AM
by plazake Go to last post
1 8,590 Solid-state high-res. NMR
Go to first new post NMR post-doc position: NMR-based dynamics study of enzyme mechanism
The following post-doc position in NMR is available in University of Missouri: Ad text: """ We have an opening for a postdoctoral fellow to use NMR to study dynamics of an enzyme while it is carrying on reversible catalysis. The prospects are promising and can be compared with thorough enzymology and crystallography of its ligand-dependent conformational changes (done in our dept.). The enzyme is sizeable enough to be challenging, but we have a battery of excellent 800 MHz spectra of deuterated samples for launching the project. The postdoctoral fellow will be housed in a new...
administrator
07-14-2007 03:55 AM
by administrator Go to last post
0 3,847 Job marketplace
Go to first new post Post-doctoral Fellow in NMR and Prion Structural Biology
...and another job advertisement requested by Dr. Wishart group. Post-doctoral Fellow Position in NMR and Prion Structural Biology Dr. Wishart's research group University of Alberta We are looking for a post-doctoral fellow with an interest and experience in NMR spectroscopy and structural biology who will undertake research in the structural characterization of hamster prion fragments using NMR spectroscopy or other biophysical methods (CD, MS, Electron Microscopy) . We have just received a 3-year, $1.7 million research grant sponsored by the Alberta Prion Research Institute...
administrator
05-09-2007 10:28 AM
by administrator Go to last post
0 4,052 Job marketplace
Go to first new post Protein chemist position is available
Posting the following job ad was requested by Dr. Wishart lab. PROTEIN CHEMIST Dr. Wishart's research group University of Alberta Position Type: Full Time - Grant Funded
administrator
05-09-2007 10:15 AM
by administrator Go to last post
0 3,602 Job marketplace
2 Attachment(s) Go to first new post Structure Determination of Protein-Ligand Complexes by Transferred Paramagnetic Shifts
Structure Determination of Protein-Ligand Complexes by Transferred Paramagnetic Shifts Michael John, Guido Pintacuda, Ah Young Park, Nicholas E. Dixon, and Gottfried Otting J. Am. Chem. Soc.; 2006; 128(39) pp 12910 - 12916; (Article) Abstract: Rational drug design depends on the knowledge of the three-dimensional (3D) structure of complexes between proteins and lead compounds of low molecular weight. A novel nuclear magnetic resonance (NMR) spectroscopy strategy based on the paramagnetic effects from lanthanide ions allows the rapid determination of the 3D structure of a small...
administrator
03-30-2007 03:03 PM
by premprakash Go to last post
1 25,932 Protein-ligand interactions
Go to first new post Patrick Finerty's MolMol binary has been added to the BioNMR's Script Downloads section.
Patrick Finerty's MolMol binary has been added to the BioNMR Downloads section.
administrator
10-05-2006 12:01 PM
by administrator Go to last post
0 31,660 Announcements
Go to first new post Installation of GROMACS 3.3.1 on Dell Inspiron 6400 with Fedora Core 6, Test 3, Dual Core processor
This is not really a "hard-core NMR topic" but it could be useful for people who try to complement dynamics data from NMR relaxation experiments with MD simulations. I had really hard time trying to install the newer versions of Gromacs 3.3 and 3.3.1 on my laptop (Dell Inspiron 6400 Dual Core processor) . The laptop used to run Suse 10.1 that was recently replaced with Fedora Core 6 Test 3 (that finally supports Intel integrated mobile 945 video cards). With both OS, Gromacs 3.3.x could be installed, however, its sub-program "genion" failed (the program never ends while consuming 100%...
administrator
10-04-2006 11:50 AM
by administrator Go to last post
0 14,354 Molecular Dynamics programs
Go to first new post Request a new message board here!
Hello everybody! If you want to have a new BioNMR.com message board dedicated to a reasonably large "hot NMR topic" or a large piece of software (like CNS or NMRView), please post your request in a reply to this post. Thanks, Mark
administrator
09-26-2006 06:46 PM
by administrator Go to last post
0 29,172 BioNMR.com development
Go to first new post NMR Postdoc position at University of Alberta; Deadline: October 30th, 2006
Post-doctoral Fellow in Prion Structural Biology Dr. Wishart research group. University of Alberta We are looking for a post-doctoral fellow with an interest and experience in NMR spectroscopyand structural biology who will undertake research in the structural characterization of hamster prion fragments using NMR spectroscopy. We have just received a 3-year, $1.7 million research grant sponsored by the Alberta Prion Research Institute (APRI) to characterize the structure and dynamics of prions using novel NMR, MS and computational methods. The individual hired for this position...
administrator
09-26-2006 12:05 PM
by administrator Go to last post
0 4,838 Job marketplace
Go to first new post Forum software replacement and URL change
Forum software was changed from Invision Power Board to vBulletin to add Directory and Download scripts to the website. Passwords could not be transferred. You will need to reset your password to login. Sorry for inconveneince! Forums were moved to www.bionmr.com/board . Webmaster.
administrator
09-26-2006 11:54 AM
by administrator Go to last post
0 7,550 Announcements
Showing results 1 to 10 of 10

 
Forum Jump


BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 03:10 AM.


Map