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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 2 of 2
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Search: Threads Started By: kmallela
  Thread / Thread Starter Last Post Replies Views Forum
Go to first new post Postdoctoral Fellow in Protein NMR and Biophysics, University of Colorado Anschutz Medical Campus
University of Colorado Anschutz Medical Campus Postdoctoral Fellow in Protein NMR and Biophysics The Department of Pharmaceutical Sciences is seeking applicants for a full-time postdoctoral fellow in protein NMR and Biophysics in the laboratory of Dr. Krishna Mallela. This position will be conducting structure-function studies on disease-related muscle proteins (Singh et al., PNAS 107 (2010) 15069 - 15074) using NMR and other biophysical techniques. The successful applicant will also contribute to the preparation of research publications and laboratory administration, and will be given...
kmallela
02-18-2011 12:02 AM
by kmallela Go to last post
0 3,739 Job marketplace
Go to first new post Postdoctoral position at the University of Colorado Health Sciences Campus
University of Colorado Denver Postdoctoral Fellow in Protein NMR and Biophysics School of Pharmacy The Department of Pharmaceutical Sciences is seeking applicants for a full time postdoctoral fellow in Protein NMR and Biophysics in the laboratory of Dr. Krishna Mallela. Current projects include probing molecular mechanisms of disease trigger and control, in particular cancer and inflammation, muscle and protein misfolding diseases using various structural and biophysical methods. Techniques like multi-dimensional NMR, biomolecular spectroscopy, protein expression and purification are...
kmallela
12-10-2008 10:40 PM
by kmallela Go to last post
0 14,756 Job marketplace
Showing results 1 to 2 of 2

 
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