my target protein exist as dimer and tetrameter , I would like to calculate the solution structure of dimer . i want extract inter distance restraints between two monomers of homo-dimer protein by using known crystal structure( pdb ). Unfortunately my c13 and n15 filter noesy experiment is failed . How to extract distance restraints from pdb of Homodimer .
Regards Srinivas
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[Question from NMRWiki Q&A forum] Generate inter-proton distance restraints from an X-ray structure
Generate inter-proton distance restraints from an X-ray structure
Hello,
Does anyone know of any program that can generate inter-proton distance restraints from an X-ray structure?I was able to use Molmol to generate dihedral angles. MolMol can also generate inter-atom distances, however, I could not figure out how to just generate 1H-1H distances. I have a total of 50,000 inter-atom distance (H-H, C-O, C-N...all types).
Any help is highly appreciated.
Winston
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How to extract inter distance restraints of homodimer protein from known crystal structure ?
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