There are several reasons mentioned on the
SEASCAPE website why there is no much of a SEASCAPE web site (see below).
- I've got the site. I just forgot it at home.
- The dog ate my homework.
- The phase of the moon isn't just right.
- Aliens have been experimenting on me.
- It's here. You just can't see it.
- My computer is solar powered and it's been cloudy.
- I didn't know anyone would *actually* look at this page.
- I'll have it tomorrow.
- I can't release it until it's checked by the National Security Agency.
- What site?
But the most important thing, a link to SEASCAPE program, is there on the web site.
Reference
Assignment of protein backbone resonances using connectivity, torsion angles and 13Calpha chemical shifts.
Morris LC, Valafar H, Prestegard JH.
Complex Carbohydrate Research Center, University of Georgia, 220 Riverbend Road, Athens, GA 30602-4712, U.S.A.
J Biomol NMR. 2004 May;29(1):1-9.
Abstract:
A program is presented which will return the most probable sequence location for a short connected set of residues in a protein given just (13)C(alpha) chemical shifts (delta((13)C(alpha))) and data restricting the phi and psi backbone angles. Data taken from both the BioMagResBank and the Protein Data Bank were used to create a probability density function (PDF) using a multivariate normal distribution in delta((13)C(alpha)), phi, and psi space for each amino acid residue. Extracting and combining probabilities for particular amino acid residues in a short proposed sequence yields a score indicative of the correctness of the proposed assignment. The program is illustrated using several proteins for which structure and (13)C(alpha) chemical shift data are available