Ask NMR questions! Earn NMR points Redeem NMR points Vote for NMR papers Twitter Ask to aggregate a site  Our Linkedin group BioNMR User Name Remember Me? Password Home Forums Wiki NMR feeds Downloads Register Today's Posts Search Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues NMR books: NMR books NMR theses: NMR theses All papers: All papers By topic: Protein-ligand interactions Solid-state high-resolution NMR NMR online resources: Educational web pages NMR presentations Educational web pages Educational videos News from other NMR forums NMR news NMR tweets NMR bookmarks NMR pictures NMR links BioNMR stuff: Feedback, suggestions, requests Announcements Test forum Sample preparation: Proteins General: General Software feature requests NMR software Spectrum analysis Molecular Modeling: NMR structure calculation Dynamics by NMR Structure analysis Molecular Dynamics Downloads: BioNMR downloads NMR processing: NMRPipe MDD NMR assignment: Backbone: Autoassign MARS UNIO Match PINE Side-chains: UNIO ATNOS-Ascan NOEs: UNIO ATNOS-Candid UNIO Candid ASDP Structure from NMR restraints: Ab initio: GeNMR Dynamo Cyana XPLOR-NIH ASDP UNIO ATNOS-Candid UNIO Candid Amber Fragment-based: BMRB CS-Rosetta Rosetta-NMR (Robetta) Template-based: GeNMR I-TASSER Refinement: Amber Structure from chemical shifts: Fragment-based: WeNMR CS-Rosetta BMRB CS-Rosetta Homology-based: CS23D Simshift Torsion angles from chemical shifts: TALOS Preditor Promega- Proline Secondary structure from chemical shifts: TALOS MICS caps, β-turns d2D PECAN CSI (via RCI server) Flexibility from chemical shifts: RCI Interactions from chemical shifts: HADDOCK Chemical shifts re-referencing: Shiftcor UNIO Shiftinspector LACS CheckShift RefDB NMR model quality: Agreement with distance restraints: PROSESS PSVS RPF scores iCing Agreement with chemical shifts: PROSESS CheShift2 Vasco iCing Agreement with RDCs: DC Anisofit Agreement with pseudocontact shifts: Anisofit Agreement with typical protein geomtery: Resolution-by-Proxy PROSESS What-If iCing PSVS MolProbity SAVES2 or SAVES4 Vadar Prosa ProQ MetaMQAPII PSQS Eval123D STAN Ramachandran Plot Rampage ERRAT Verify_3D Harmony Quality Control Check NMR spectrum prediction: FANDAS MestReS V-NMR Flexibility from structure: Backbone S2 Methyl S2 B-factor Molecular dynamics: Gromacs Amber Antechamber Chemical shifts prediction: From structure: Shiftx2 Sparta+ Camshift CH3shift- Methyl ArShift- Aromatic ShiftS Proshift PPM CheShift-2- Cα From sequence: Shifty Camcoil Poulsen_rc_CS Disordered proteins: MAXOCC Format conversion & validation: CCPN From NMR-STAR 3.1 Validate NMR-STAR 3.1 NMR sample preparation: Protein disorder: DisMeta Protein solubility: camLILA ccSOL Camfold camGroEL Zyggregator Isotope labeling: UPLABEL Solid-state NMR: sedNMR

» NMR Jobs Professor or Associate Professor in Biological NMR Spetroscopy at Aarhus University (874792) |... by nmrlearner Principal Analytical Chemist | Calhoun Vision, Inc. by nmrlearner Assistant, Associate or Full Professor of Pharmacognosy | The University of Mississippi, School of... by nmrlearner » Cool papers Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR by nmrlearner Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A... by nmrlearner Dynamics of Coordinated Phosphonate Group Directly Observed by 17O-NMR in Lanthanide(III) Complexes... by nmrlearner » NMR books Solid State Properties of Pharmaceutical Materials by nmrlearner NMR Data Interpretation Explained: Understanding 1D and 2D NMR Spectra of Organic Compounds and... by nmrlearner Guide to Fluorine NMR for Organic Chemists, 2nd Edition by nmrlearner » NMR theses A Pulse NMR Trilogy: Anomalies, Anisotropies, and Adsorption by nmrlearner NMR imaging of solids with multiple-pulse line narrowing and radiofrequency gradients by nmrlearner Metabolic engineering applications of in vivo [superscript 31]P and [superscript 13]C NMR studies... by nmrlearner » NMR blogs New blog site by nmrlearner EasySpin Academy (online), Oct 13-15, 2020 by nmrlearner A compact X-Band ODNP spectrometer towards hyperpolarized 1H spectroscopy #DNPNMR #ODNP by nmrlearner » NMR news Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com by nmrlearner Volume and compressibility differences between protein conformations revealed by high-pressure NMR... by nmrlearner Lipid-protein stoichiometries in a crystalline biological membrane: NMR quantitative analysis of... by nmrlearner » NMR tweets NMR tweet Hyperpolarized diamond nuclei increase NMR/MRI sensitivity: Today?s nuclear magnetic... by nmrlearner Hyperpolarized diamond nuclei increase NMR/MRI sensitivity: Today?s nuclear magnetic resonance... by nmrlearner iNMR enables you to process and visualize Nuclear Magnetic Resonance spectra. Have you been longing... by nmrlearner » NMR videos Jack Vale Interview | NMR Feature by nmrlearner NMR Made Easy! Part 6A - NMR to Molecule Structure - Organic Chemistry by nmrlearner Another introduction to proton NMR (9) by nmrlearner » NMR pictures butanone by nmrlearner ... temporal lobe epilepsy: a 1 H magnetic resonance spectroscopy study by nmrlearner Figure 12. Closed field magnetic resonance imaging machine [16]. by nmrlearner » Online Users: 259 0 members and 259 guests No Members online Most users ever online was 1,278, 01-09-2024 at 07:38 AM.

» Welcome! Welcome, NMR world! Our visitors map. » Log in User Name Remember Me? Not a member yet? Register Now! Password All atom insights into the impact of crowded environments on protein stability by NMR spectroscopy - Nature.com Mar 30, 2024 - 9:22 AM - by nmrlearner All atom insights into the impact of crowded environments on protein stability by NMR spectroscopy - Nature.com All atom insights into the impact of crowded environments on protein stability by NMR spectroscopy Nature.com Read here 0 Replies | 85 Views Temporal and spatial characterisation of protein liquid-liquid phase separation using NMR spectroscopy - Nature.com Mar 30, 2024 - 9:22 AM - by nmrlearner Temporal and spatial characterisation of protein liquid-liquid phase separation using NMR spectroscopy - Nature.com Temporal and spatial characterisation of protein liquid-liquid phase separation using NMR spectroscopy Nature.com Read here 0 Replies | 71 Views Protein structure determination in living cells by in-cell NMR spectroscopy - Nature.com Mar 30, 2024 - 9:22 AM - by nmrlearner Protein structure determination in living cells by in-cell NMR spectroscopy - Nature.com Protein structure determination in living cells by in-cell NMR spectroscopy Nature.com Read here 0 Replies | 75 Views Expanding the membrane-protein NMR toolkit - Nature.com Mar 30, 2024 - 9:22 AM - by nmrlearner Expanding the membrane-protein NMR toolkit - Nature.com Expanding the membrane-protein NMR toolkit Nature.com Read here 0 Replies | 84 Views [NMR paper] Dimerization of the beta-Hairpin Membrane-Active Cationic Antimicrobial Peptide Capitellacin from Marine Polychaeta: An NMR Structural and Thermodynamic Study Mar 29, 2024 - 7:50 PM - by nmrlearner Dimerization of the beta-Hairpin Membrane-Active Cationic Antimicrobial Peptide Capitellacin from Marine Polychaeta: An NMR Structural and Thermodynamic Study Capitellacin is the ?-hairpin membrane-active cationic antimicrobial peptide from the marine polychaeta Capitella teleta. Capitellacin exhibits antibacterial activity, including against drug-resistant strains. To gain insight into the mechanism of capitellacin action, we investigated the structure of the peptide in the membrane-mimicking environment of dodecylphosphocholine (DPC) micelles using high-resolution NMR spectroscopy. In DPC solution, two structural forms of capitellacin were observed:... More... 0 Replies | 166 Views [NMR paper] Elucidation of the mechanisms of inter-domain coupling in the monomeric state of Enzyme I by high-pressure NMR Mar 29, 2024 - 7:43 AM - by nmrlearner Elucidation of the mechanisms of inter-domain coupling in the monomeric state of Enzyme I by high-pressure NMR The catalytic cycle of Enzyme I (EI), a phosphotransferase enzyme responsible for converting phosphoenolpyruvate (PEP) into pyruvate, is characterized by a series of local and global conformational rearrangements. This multistep process includes a monomer-to-dimer transition, followed by an open-to-closed rearrangement of the dimeric complex upon PEP binding. In the present study, we investigate the thermodynamics of EI dimerization using a range of high-pressure solution NMR techniques... More... 0 Replies | 98 Views [NMR paper] Metabolomic response to acute resistance exercise in healthy older adults by 1H-NMR Mar 29, 2024 - 7:43 AM - by nmrlearner Metabolomic response to acute resistance exercise in healthy older adults by 1H-NMR CONCLUSIONS: This study demonstrates that while many exercise-responsive metabolites change similarly in young and older adults, several demonstrate age-dependent changes even in the absence of evidence of sarcopenia or frailty. More... 0 Replies | 89 Views Enabling site-specific NMR investigations of therapeutic FabÂ*using a cell-free based isotopic labeling approach:Â*application to anti-LAMP1 Fab Mar 28, 2024 - 7:10 PM - by nmrlearner Enabling site-specific NMR investigations of therapeutic FabÂ*using a cell-free based isotopic labeling approach:Â*application to anti-LAMP1 Fab Abstract Monoclonal antibodies (mAbs) are biotherapeutics that have achieved outstanding success in treating many life-threatening and chronic diseases. The recognition of an antigen is mediated by the fragment antigen binding (Fab) regions composed by four different disulfide bridge-linked immunoglobulin domains. NMR is a powerful method to assess the integrity, the structure and interaction of Fabs, but site specific analysis has been so far hampered by the size of the Fabs and the lack of approaches to produce isotopically labeled samples. We proposed here an efficient in vitro method to produce [15N, 13C, 2H]-labeled Fabs enabling high resolution NMR investigations of these powerful therapeutics. As an open system, the cell-free expression mode enables fine-tuned control of the redox potential in presence of disulfide bond isomerase to enhance the formation of native disulfide bonds. Moreover, inhibition of transaminases in the S30 cell-free extract offers the opportunity to produce perdeuterated Fab samples directly in 1H2O medium, without the need for a time-consuming and inefficient refolding process. This specific protocol was applied to produce an optimally labeled sample of a therapeutic Fab, enabling the sequential assignment of 1HN, 15N, 13Câ?², 13Cα, 13Cβ resonances of a full-length Fab. 90% of the backbone resonances of a Fab domain directed against the human LAMP1 glycoprotein were assigned successfully, opening new opportunities to study, at atomic resolution, Fabsâ?? higher order structures, dynamics and interactions, using solution-state NMR. ... [Read More] 0 Replies | 115 Views Page 5 of 100 « First < 3 4 5 6 7 15 55 > Last »

» Search Forums » Advanced Search » BioNMR wiki NMR job online resources by nmrlearner List of Linux distributions that offer easy PyMol installation via a package manager by markber Compiling and installing MolMol under Linux from Louic S. Vermeer blog by markber » NMR discussion Journal Highlight: 3D printed NMR spectra: From 1D and 2D acquisition to 3D visualization by nmrlearner Golden probe: Opening the cluster by nmrlearner Journal Highlight: Explosive emulsion characterisation using nuclear magnetic resonance by nmrlearner » NMR conferences PANIC 2018 - Practical Applications of NMR in Industry Conference by nmrlearner Practical Applications of NMR in Industry Conference (PANIC) by nmrlearner PANIC 2016 - Practical Applications of NMR in Industry Conference by nmrlearner » NMR software A source of RPMs for several NMR-related programs by nmrlearner New File Added: GARANT by Chris. Bart. Basics of Mathematica to Understand POMA by nmrlearner » Pulse sequences Pulse programs by sivanmr Bruker GFT-NMR pulse programs from Dr. Gao website by nmrlearner BMRB library of Bruker pulse sequences by nmrlearner » NMR community NMR Group of Gary Shaw at the University of Western Ontario by mrevingt "Eureka moments" push U of A researcher to top publishing spot - The Gateway Online by nmrlearner Prof. Konstantin Pervushin's NMR group by markber » NMR presentations Humans, aliens, and eHarmony or why there is no such thing as a free lunch in protein structure... by markber » NMR web resources NMR and MRI related tools and short programs by nmrlearner Advanced NMR Spectroscopy by nmrlearner Understanding NMR Spectroscopy - The Solutions and Figures by nmrlearner » NMR feature requests Are you interested in further development of PPT-DB: the protein property prediction and testing... by markber » NMR bookmarks Aldrich library of NMR spectra by nmrlearner NMR spectra of polymers and polymer additives by nmrlearner nmr basics by nmrlearner » Stats Members: 3,202 Threads: 25,730 Posts: 26,116 Top Poster: nmrlearner (23,174) Welcome to our newest member, bpadmanabhan