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» Welcome! Welcome, NMR world! Our visitors map. » Log in User Name Remember Me? Not a member yet? Register Now! Password [NMR paper] NMR study of the structure and dynamics of the BRCT domain from the kinetochore protein KKT4 Mar 09, 2024 - 12:05 AM - by nmrlearner NMR study of the structure and dynamics of the BRCT domain from the kinetochore protein KKT4 KKT4 is a multi-domain kinetochore protein specific to kinetoplastids, such as Trypanosoma brucei. It lacks significant sequence similarity to known kinetochore proteins in other eukaryotes. Our recent X-ray structure of the C-terminal region of KKT4 shows that it has a tandem BRCT (BRCA1 C Terminus) domain fold with a sulfate ion bound in a typical binding site for a phosphorylated serine or threonine. Here we present the ¹H, ^(13)C and ^(15)N resonance assignments for the BRCT domain of KKT4... More... 0 Replies | 244 Views Atomic resolution conformational dynamics of intrinsically disordered proteins from NMR spin relaxation - ScienceDirect.com Mar 07, 2024 - 10:30 PM - by nmrlearner Atomic resolution conformational dynamics of intrinsically disordered proteins from NMR spin relaxation - ScienceDirect.com Atomic resolution conformational dynamics of intrinsically disordered proteins from NMR spin relaxation ScienceDirect.com Read here 0 Replies | 89 Views Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... - pnas.org Mar 06, 2024 - 5:10 PM - by nmrlearner Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... - pnas.org Protein–ice interaction of an antifreeze protein observed with solid-state NMR | Proceedings of the National Academy ... pnas.org Read here 0 Replies | 92 Views [NMR paper] Optimization of reverse NOE pumping experiments in the analysis of complex systems with densely crowded NMR spectra Mar 06, 2024 - 5:10 PM - by nmrlearner Optimization of reverse NOE pumping experiments in the analysis of complex systems with densely crowded NMR spectra We present an optimization of Reverse NOE-pumping (RNP) in order to observe the ¹H signals of ligands bound to proteins. Although various ligand-based NMR screening methods have been proposed, the most frequently used method has been Saturation-Transfer Difference (STD), owing to the relatively easy setup of experiments. Yet the critical point of STD is the selective irradiation of protein without irradiating ligand, and thus the STD technique is unable to observe ¹H ligand signals, which... More... 0 Replies | 252 Views [NMR paper] In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells Mar 06, 2024 - 5:10 PM - by nmrlearner In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells I-Motifs (iM) are non-canonical DNA structures potentially forming in the accessible, single-stranded, cytosine-rich genomic regions with regulatory roles. Chromatin, protein interactions, and intracellular properties seem to govern iM formation at sites with i-motif formation propensity (iMFPS) in human cells, yet their specific contributions remain unclear. Using in-cell NMR with oligonucleotide iMFPS models, we monitor iM-associated structural equilibria in asynchronous and cell... More... 0 Replies | 54 Views [NMR paper] Organic Fluorophores with Large Stokes Shift for the Visualization of Rapid Protein and Nucleic Acid Assays Mar 06, 2024 - 5:10 PM - by nmrlearner Organic Fluorophores with Large Stokes Shift for the Visualization of Rapid Protein and Nucleic Acid Assays Angewandte Chemie International Edition, Accepted Article. More... 0 Replies | 64 Views [NMR paper] Fragment-Based Deep Learning for Simultaneous Prediction of Polarizabilities and NMR Shieldings of Macromolecules and Their Aggregates Mar 06, 2024 - 5:09 AM - by nmrlearner Fragment-Based Deep Learning for Simultaneous Prediction of Polarizabilities and NMR Shieldings of Macromolecules and Their Aggregates Simultaneous prediction of the molecular response properties, such as polarizability and the NMR shielding constant, at a low computational cost is an unresolved issue. We propose to combine a linear-scaling generalized energy-based fragmentation (GEBF) method and deep learning (DL) with both molecular and atomic information-theoretic approach (ITA) quantities as effective descriptors. In GEBF, the total molecular polarizability can be assembled as a linear combination of the corresponding... More... 0 Replies | 99 Views [NMR paper] A Universal and Programmable Platform based on Fluorescent Peptide-Conjugated Probes for Detection of Proteins in Organelles of Living Cells Mar 06, 2024 - 5:09 AM - by nmrlearner A Universal and Programmable Platform based on Fluorescent Peptide-Conjugated Probes for Detection of Proteins in Organelles of Living Cells Angewandte Chemie International Edition, Accepted Article. More... 0 Replies | 70 Views Page 12 of 100 « First < 2 10 11 12 13 14 22 62 > Last »

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