NMR tweet nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins

		BioNMR > NMR community > Twitter NMR
[NMR tweet] nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-05-2011, 08:06 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,178

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins

nuclear magnetic resonance (NMR) is used to determine structures, it yields info on dynamics of proteins

Published by Abbkr (Sadeeq sheshe) on 2011-08-05T20:01:29Z

Source: Twitter

Did you find this post helpful?

08-23-2011, 02:49 AM

gavinfree101 gavinfree101 is offline

Junior Member

Join Date: Aug 2011

Posts: 4

Points: 18, Level: 1

Level up: 35%, 32 Points needed

Activity: 21.1%

NMR Credits: 0

NMR Points: 18

Downloads: 0

Uploads: 0

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR tweet] Biophysical examination of proteins by nuclear magnetic resonance:Atomic structures of macromolecules in solution Biophysical examination of proteins by nuclear magnetic resonance:Atomic structures of macromolecules in solution Published by Theanphropy (James-N LEE-ANGEL) on 2011-12-24T00:17:57Z Source: Twitter	nmrlearner	Twitter NMR	0	12-24-2011 12:27 AM
[NMR tweet] Baker Lab. Large protein structures can now b determined by incorporating backbone-only NMR (Nuclear Magnetic Resonance) data into Rosetta.. Baker Lab. Large protein structures can now b determined by incorporating backbone-only NMR (Nuclear Magnetic Resonance) data into Rosetta.. Published by zukaraSophia (A, just A) on 2011-06-14T19:46:43Z Source: Twitter	nmrlearner	Twitter NMR	0	06-14-2011 07:50 PM
[NMR tweet] http://www.kindbooks.net/nmr-from-spectra-to-structures-an-experimental-approach.html #magnetic #resonance #spectroscopy #nuclear NMR - http://www.kindbooks.net/nmr-from-spectra-to-structures-an-experimental-approach.html #magnetic #resonance #spectroscopy #nuclear NMR - Published by kindbooks (scoot bull) on 2011-05-13T13:32:25Z Source: Twitter	nmrlearner	Twitter NMR	0	05-13-2011 01:40 PM
[NMR tweet] http://www.pulist.net/spin-dynamics-basics-of-nuclear-magnetic-resonance.html #quarks #and #nucleons #nuclear Spin Dynamics: Basics of N http://www.pulist.net/spin-dynamics-basics-of-nuclear-magnetic-resonance.html #quarks #and #nucleons #nuclear Spin Dynamics: Basics of N Published by pubooks (Joel Michal) on 2011-03-31T07:54:11Z Source: Twitter	nmrlearner	Twitter NMR	0	03-31-2011 08:09 AM
[NMR tweet] ????????? http://nurseone.info/k/528 #Nuclear #magnetic #resonance #Nuclear #magnetic #resonance ????????? http://nurseone.info/k/528 #Nuclear #magnetic #resonance #Nuclear #magnetic #resonance Published by nananars (nananars) on 2011-03-25T16:03:19Z Source: Twitter	nmrlearner	Twitter NMR	0	03-25-2011 04:24 PM
[NMR tweet] By studying the peaks of nuclear magnetic resonance spectra, chemists can determine the structure of many compounds. By studying the peaks of nuclear magnetic resonance spectra, chemists can determine the structure of many compounds. Published by Sin_ichi (M Nurrohman Sidiq) on 2010-12-01T08:30:06Z Source: Twitter	nmrlearner	Twitter NMR	0	12-01-2010 08:31 AM
[NMR paper] Resonance assignment of proteins with high shift degeneracy based on 5D spectral info Resonance assignment of proteins with high shift degeneracy based on 5D spectral information encoded in G2FT NMR experiments. Related Articles Resonance assignment of proteins with high shift degeneracy based on 5D spectral information encoded in G2FT NMR experiments. J Am Chem Soc. 2005 Apr 6;127(13):4554-5 Authors: Atreya HS, Eletsky A, Szyperski T A suite of novel (5,3)D G2FT triple resonance NMR experiments encoding highly resolved 5D spectral information is presented for sequential resonance assignment of proteins exhibiting high chemical...	nmrlearner	Journal club	0	11-25-2010 08:21 PM
Using relaxation dispersion NMR spectroscopy to determine structures of excited, invisible protein states Using relaxation dispersion NMR spectroscopy to determine structures of excited, invisible protein states D. Flemming Hansen, Pramodh Vallurupalli and Lewis E. Kay Journal of Biomolecular NMR; 2008; 41(3); pp 113 - 120 Abstract: Currently the main focus of structural biology is the determination of static three-dimensional representations of biomolecules that for the most part correspond to low energy (ground state) conformations. However, it is becoming increasingly well recognized that higher energy structures often play important roles in function as well. Because these conformers...	daniel	Journal club	0	08-03-2008 03:16 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is Off Trackbacks are Off Pingbacks are Off Refbacks are Off