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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 25 of 500
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Search: Posts Made By: nmrlearner
Forum: Journal club Today, 04:15 AM
Replies: 0
Views: 12
Posted By nmrlearner
Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy

Including the Ensemble of Unstructured Conformations in the Analysis of Protein's Native State by High-Pressure NMR Spectroscopy...
Forum: Journal club Yesterday, 05:58 AM
Replies: 0
Views: 13
Posted By nmrlearner
NMR metabolomic modeling of age and lifespan: A multicohort analysis

NMR metabolomic modeling of age and lifespan: A multicohort analysis...
Forum: Journal club Yesterday, 05:58 AM
Replies: 0
Views: 11
Posted By nmrlearner
Solution NMR chemical shift assignment of apo and molybdate-bound ModA at two pHs

Solution NMR chemical shift assignment of apo and molybdate-bound ModA at two pHs...
Forum: Journal club Yesterday, 05:58 AM
Replies: 0
Views: 9
Posted By nmrlearner
Quantification of Residual Water in Pharmaceutical Frozen Solutions via (1)H Solid-state NMR

Quantification of Residual Water in Pharmaceutical Frozen Solutions via (1)H Solid-state NMR...
Forum: Journal club Yesterday, 05:58 AM
Replies: 0
Views: 9
Posted By nmrlearner
Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure

Formerly degenerate seventh zinc finger domain from transcription factor ZNF711 rehabilitated by experimental NMR structure...
Forum: Journal club Yesterday, 05:58 AM
Replies: 0
Views: 11
Posted By nmrlearner
Imaging of adeno-associated viral capsids for purposes of gene editing using CEST NMR/MRI

Imaging of adeno-associated viral capsids for purposes of gene editing using CEST NMR/MRI...
Forum: Journal club Yesterday, 05:58 AM
Replies: 0
Views: 64
Posted By nmrlearner
Protein Allostery Study in Cells Using NMR Spectroscopy

Protein Allostery Study in Cells Using NMR Spectroscopy...
Forum: Online News 04-22-2024, 02:18 PM
Replies: 0
Views: 31
Posted By nmrlearner
Optimal isotope labelling for NMR protein structure determinations - Nature.com

Optimal isotope labelling for NMR protein structure determinations - Nature.com

Optimal isotope labelling for NMR protein structure determinations...
Forum: Online News 04-21-2024, 07:50 AM
Replies: 0
Views: 37
Posted By nmrlearner
Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Financial Times

Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Financial Times

Bruker Introduces Novel NMR Scientific Capabilities for...
Forum: Online News 04-21-2024, 07:50 AM
Replies: 0
Views: 34
Posted By nmrlearner
Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Yahoo Finance

Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Yahoo Finance

Bruker Introduces Novel NMR Scientific Capabilities for...
Forum: Journal club 04-19-2024, 11:48 PM
Replies: 0
Views: 326
Posted By nmrlearner
Targeted Degradation of Cell-Surface Proteins via Chaperone-Mediated Autophagy by Using Peptide-Conjugated Antibodies

Targeted Degradation of Cell-Surface Proteins via Chaperone-Mediated Autophagy by Using Peptide-Conjugated Antibodies (https://onlinelibrary.wiley.com/doi/10.1002/anie.202319232?af=R)


Angewandte...
Forum: Journal club 04-18-2024, 07:01 PM
Replies: 0
Views: 104
Posted By nmrlearner
Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR

Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 41
Posted By nmrlearner
Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A low-field (1)H NMR study

Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A low-field (1)H NMR study...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 39
Posted By nmrlearner
Dynamics of Coordinated Phosphonate Group Directly Observed by 17O-NMR in Lanthanide(III) Complexes of a Mono(ethyl phosphonate) DOTA Analogue

Dynamics of Coordinated Phosphonate Group Directly Observed by 17O-NMR in Lanthanide(III) Complexes of a Mono(ethyl phosphonate) DOTA Analogue...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 119
Posted By nmrlearner
DREAMweb: An online tool for graph-based modeling of NMR protein structure

DREAMweb: An online tool for graph-based modeling of NMR protein structure...
Forum: Online News 04-17-2024, 03:38 PM
Replies: 0
Views: 38
Posted By nmrlearner
Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Characterization of membrane protein function by solid-state NMR spectroscopy...
Forum: Journal club 04-14-2024, 12:08 AM
Replies: 0
Views: 301
Posted By nmrlearner
SCREENES: Enhancing non-uniform sampling reconstruction for symmetrical NMR spectroscopy

SCREENES: Enhancing non-uniform sampling reconstruction for symmetrical NMR spectroscopy...
Forum: Online News 04-14-2024, 12:08 AM
Replies: 0
Views: 55
Posted By nmrlearner
Volume and compressibility differences between protein conformations revealed by high-pressure NMR - ScienceDirect.com

Volume and compressibility differences between protein conformations revealed by high-pressure NMR - ScienceDirect.com

Volume and compressibility differences between protein conformations revealed...
Forum: Online News 04-14-2024, 12:08 AM
Replies: 0
Views: 59
Posted By nmrlearner
Lipid-protein stoichiometries in a crystalline biological membrane: NMR quantitative analysis of the lipid extract of the ... - ScienceDirect.com

Lipid-protein stoichiometries in a crystalline biological membrane: NMR quantitative analysis of the lipid extract of the ... - ScienceDirect.com

Lipid-protein stoichiometries in a crystalline...
Forum: Online News 04-14-2024, 12:08 AM
Replies: 0
Views: 56
Posted By nmrlearner
The NMR structure of the Ea22 lysogenic developmental protein from lambda bacteriophage | Scientific Reports - Nature.com

The NMR structure of the Ea22 lysogenic developmental protein from lambda bacteriophage | Scientific Reports - Nature.com

The NMR structure of the Ea22 lysogenic developmental protein from lambda...
Forum: Journal club 04-11-2024, 09:29 AM
Replies: 0
Views: 46
Posted By nmrlearner
Structural analysis of ATP bound to the F(1)-ATPase beta-subunit monomer by solid-state NMR- insight into the hydrolysis mechanism in F(1)

Structural analysis of ATP bound to the F(1)-ATPase beta-subunit monomer by solid-state NMR- insight into the hydrolysis mechanism in F(1)...
Forum: Journal club 04-11-2024, 09:29 AM
Replies: 0
Views: 244
Posted By nmrlearner
4,4-Difluoroproline as a Unique (19)F NMR Probe of Proline Conformation

4,4-Difluoroproline as a Unique (19)F NMR Probe of Proline Conformation...
Forum: Online News 04-09-2024, 12:27 PM
Replies: 0
Views: 93
Posted By nmrlearner
Structural details of amyloid ? oligomers in complex with human prion protein as revealed by solid-state MAS NMR ... - ScienceDirect.com

Structural details of amyloid ? oligomers in complex with human prion protein as revealed by solid-state MAS NMR ... - ScienceDirect.com

Structural details of amyloid ? oligomers in complex with...
Forum: Online News 04-09-2024, 12:27 PM
Replies: 0
Views: 97
Posted By nmrlearner
Horse Prion Protein NMR Structure and Comparisons with Related Variants of the Mouse Prion Protein - ScienceDirect.com

Horse Prion Protein NMR Structure and Comparisons with Related Variants of the Mouse Prion Protein - ScienceDirect.com

Horse Prion Protein NMR Structure and Comparisons with Related Variants of...
Forum: Online News 04-09-2024, 12:27 PM
Replies: 0
Views: 99
Posted By nmrlearner
Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Chronicle-Tribune

Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Chronicle-Tribune

Bruker Introduces Novel NMR Scientific Capabilities for...
Showing results 1 to 25 of 500

 
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