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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 10 of 10
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Go to first new post Structure of 'immortality protein' now better understood - Science Codex
Structure of 'immortality protein' now better understood - Science Codex Structure of 'immortality protein' now better understood Science Codex Read here
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Online News
Go to first new post Global Protein Crystallization & Crystallography Market Is Expected to Reach USD 1.97 Billion by 2027 : Fior Markets - globenewswire.com
Global Protein Crystallization & Crystallography Market Is Expected to Reach USD 1.97 Billion by 2027 : Fior Markets - globenewswire.com Global Protein Crystallization & Crystallography Market Is Expected to Reach USD 1.97 Billion by 2027 : Fior Markets globenewswire.com Read here
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Online News
Go to first new post Protein Crystallization & Crystallography Market Research Report by Technology, by Product & Service, by End User - Global Forecast to 2025 - Cumulative Impact of COVID-19 - GlobeNewswire
Protein Crystallization & Crystallography Market Research Report by Technology, by Product & Service, by End User - Global Forecast to 2025 - Cumulative Impact of COVID-19 - GlobeNewswire Protein Crystallization & Crystallography Market Research Report by Technology, by Product & Service, by End User - Global Forecast to 2025 - Cumulative Impact of COVID-19 GlobeNewswire Read here
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Online News
Go to first new post Technique permits convenient, precise optical imaging of individual proteins - Phys.org
Technique permits convenient, precise optical imaging of individual proteins - Phys.org Technique permits convenient, precise optical imaging of individual proteins Phys.org Read here
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Online News
Go to first new post [NMR paper] Solid state NMR assignments of a human ?-III immunoglobulin light chain amyloid fibril.
Solid state NMR assignments of a human ?-III immunoglobulin light chain amyloid fibril. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--production.springer.de-OnlineResources-Logos-springerlink.gif Related Articles Solid state NMR assignments of a human ?-III immunoglobulin light chain amyloid fibril. Biomol NMR Assign. 2020 Sep 18;: Authors: Pradhan T, Annamalai K, Sarkar R, Hegenbart U, Schönland S, Fändrich M, Reif B Abstract The aggregation of antibody light chains is linked to systemic light...
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Journal club
Go to first new post [NMR paper] Solution NMR structure of Borrelia burgdorferi outer surface lipoprotein BBP28, a member of the mlp protein family.
Solution NMR structure of Borrelia burgdorferi outer surface lipoprotein BBP28, a member of the mlp protein family. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--media.wiley.com-assets-7388-69-wiley-full-text.png Related Articles Solution NMR structure of Borrelia burgdorferi outer surface lipoprotein BBP28, a member of the mlp protein family. Proteins. 2020 Sep 18;: Authors: Fridmanis J, Otikovs M, Brangulis K, T?rs K, Jaudzems K Abstract Lyme disease is the most widespread vector-transmitted...
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Journal club
Go to first new post [NMR paper] Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation.
Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--media.wiley.com-assets-7388-69-wiley-full-text.png Related Articles Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation. Protein Sci. 2020 Sep 18;: Authors: Zhang N, Chang YG, Tseng R, Ovchinnikov S, Schwarz R, LiWang A Abstract Biofilms are accumulations of microorganisms embedded in...
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Journal club
Go to first new post Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation
Solution NMR structure of Se0862, a highly conserved cyanobacterial protein involved in biofilm formation ABSTRACT Biofilms are accumulations of microorganisms embedded in extracellular matrices that protect against external factors and stressful environments. Cyanobacterial biofilms are ubiquitous and have potential for treatment of wastewater and sustainable production of biofuels. But the underlying mechanisms regulating cyanobacterial biofilm formation are unclear. Here, we report the solution NMR structure of a protein, Se0862, conserved across diverse cyanobacterial species and...
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Journal club
Go to first new post [ASAP] Picometer Resolution Structure of the Coordination Sphere in the Metal-Binding Site in a Metalloprotein by NMR
Picometer Resolution Structure of the Coordination Sphere in the Metal-Binding Site in a Metalloprotein by NMR Andrea Bertarello, Ladislav Benda, Kevin J. Sanders, Andrew J. Pell, Michael J. Knight, Vladimir Pelmenschikov, Leonardo Gonnelli, Isabella C. Felli, Martin Kaupp, Lyndon Emsley, Roberta Pierattelli, and Guido Pintacuda https://pubs.acs.org/na101/home/literatum/publisher/achs/journals/content/jacsat/0/jacsat.ahead-of-print/jacs.0c07339/20200919/images/medium/ja0c07339_0005.gif Journal of the American Chemical Society DOI: 10.1021/jacs.0c07339...
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Journal club
Go to first new post Correction to: The role of NMR in leveraging dynamics and entropy in drug design
Correction to: The role of NMR in leveraging dynamics and entropy in drug design Unfortunately, in the original publication, Fig.Â*5 was published incorrectly. The correct version is given below: Source: Journal of Biomolecular NMR
nmrlearner
Yesterday 05:44 PM
by nmrlearner Go to last post
0 1 Journal club
Showing results 1 to 10 of 10

 
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