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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 25 of 500
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Search: Posts Made By: nmrlearner
Forum: Journal club Yesterday, 07:01 PM
Replies: 0
Views: 60
Posted By nmrlearner
Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR

Quantification of Biopharmaceutically Relevant Nonionic Surfactant Excipients Using Benchtop qNMR...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 17
Posted By nmrlearner
Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A low-field (1)H NMR study

Unraveling the role of probiotics in affecting the structure of monoglyceride gelled emulsions: A low-field (1)H NMR study...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 11
Posted By nmrlearner
Dynamics of Coordinated Phosphonate Group Directly Observed by 17O-NMR in Lanthanide(III) Complexes of a Mono(ethyl phosphonate) DOTA Analogue

Dynamics of Coordinated Phosphonate Group Directly Observed by 17O-NMR in Lanthanide(III) Complexes of a Mono(ethyl phosphonate) DOTA Analogue...
Forum: Journal club 04-17-2024, 03:38 PM
Replies: 0
Views: 99
Posted By nmrlearner
DREAMweb: An online tool for graph-based modeling of NMR protein structure

DREAMweb: An online tool for graph-based modeling of NMR protein structure...
Forum: Online News 04-17-2024, 03:38 PM
Replies: 0
Views: 13
Posted By nmrlearner
Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Characterization of membrane protein function by solid-state NMR spectroscopy - ScienceDirect.com

Characterization of membrane protein function by solid-state NMR spectroscopy...
Forum: Journal club 04-14-2024, 12:08 AM
Replies: 0
Views: 280
Posted By nmrlearner
SCREENES: Enhancing non-uniform sampling reconstruction for symmetrical NMR spectroscopy

SCREENES: Enhancing non-uniform sampling reconstruction for symmetrical NMR spectroscopy...
Forum: Online News 04-14-2024, 12:08 AM
Replies: 0
Views: 30
Posted By nmrlearner
Volume and compressibility differences between protein conformations revealed by high-pressure NMR - ScienceDirect.com

Volume and compressibility differences between protein conformations revealed by high-pressure NMR - ScienceDirect.com

Volume and compressibility differences between protein conformations revealed...
Forum: Online News 04-14-2024, 12:08 AM
Replies: 0
Views: 36
Posted By nmrlearner
Lipid-protein stoichiometries in a crystalline biological membrane: NMR quantitative analysis of the lipid extract of the ... - ScienceDirect.com

Lipid-protein stoichiometries in a crystalline biological membrane: NMR quantitative analysis of the lipid extract of the ... - ScienceDirect.com

Lipid-protein stoichiometries in a crystalline...
Forum: Online News 04-14-2024, 12:08 AM
Replies: 0
Views: 32
Posted By nmrlearner
The NMR structure of the Ea22 lysogenic developmental protein from lambda bacteriophage | Scientific Reports - Nature.com

The NMR structure of the Ea22 lysogenic developmental protein from lambda bacteriophage | Scientific Reports - Nature.com

The NMR structure of the Ea22 lysogenic developmental protein from lambda...
Forum: Journal club 04-11-2024, 09:29 AM
Replies: 0
Views: 29
Posted By nmrlearner
Structural analysis of ATP bound to the F(1)-ATPase beta-subunit monomer by solid-state NMR- insight into the hydrolysis mechanism in F(1)

Structural analysis of ATP bound to the F(1)-ATPase beta-subunit monomer by solid-state NMR- insight into the hydrolysis mechanism in F(1)...
Forum: Journal club 04-11-2024, 09:29 AM
Replies: 0
Views: 228
Posted By nmrlearner
4,4-Difluoroproline as a Unique (19)F NMR Probe of Proline Conformation

4,4-Difluoroproline as a Unique (19)F NMR Probe of Proline Conformation...
Forum: Online News 04-09-2024, 12:27 PM
Replies: 0
Views: 66
Posted By nmrlearner
Structural details of amyloid ? oligomers in complex with human prion protein as revealed by solid-state MAS NMR ... - ScienceDirect.com

Structural details of amyloid ? oligomers in complex with human prion protein as revealed by solid-state MAS NMR ... - ScienceDirect.com

Structural details of amyloid ? oligomers in complex with...
Forum: Online News 04-09-2024, 12:27 PM
Replies: 0
Views: 71
Posted By nmrlearner
Horse Prion Protein NMR Structure and Comparisons with Related Variants of the Mouse Prion Protein - ScienceDirect.com

Horse Prion Protein NMR Structure and Comparisons with Related Variants of the Mouse Prion Protein - ScienceDirect.com

Horse Prion Protein NMR Structure and Comparisons with Related Variants of...
Forum: Online News 04-09-2024, 12:27 PM
Replies: 0
Views: 66
Posted By nmrlearner
Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Chronicle-Tribune

Bruker Introduces Novel NMR Scientific Capabilities for Structural Biology Discoveries in Membrane Proteins and ... - Chronicle-Tribune

Bruker Introduces Novel NMR Scientific Capabilities for...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 43
Posted By nmrlearner
(17)O Solid-State NMR Spectroscopy of Lipid Membranes

(17)O Solid-State NMR Spectroscopy of Lipid Membranes...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 49
Posted By nmrlearner
Predicting the Stability of Lyophilized Human Serum Albumin Formulations Containing Sucrose and Trehalose Using Solid-State NMR Spectroscopy: Effect of Storage Temperature on (1)H T(1) Relaxation Times

Predicting the Stability of Lyophilized Human Serum Albumin Formulations Containing Sucrose and Trehalose Using Solid-State NMR Spectroscopy: Effect of Storage Temperature on (1)H T(1) Relaxation...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 39
Posted By nmrlearner
1D and 2D NMR for KRAS:Ligand Binding

1D and 2D NMR for KRAS:Ligand Binding...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 38
Posted By nmrlearner
Profiling Complex RAS-Effector Interactions Using NMR Spectroscopy

Profiling Complex RAS-Effector Interactions Using NMR Spectroscopy...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 38
Posted By nmrlearner
Real-Time Monitoring of RAS Activity Using In Vitro and In-Cell NMR Spectroscopy

Real-Time Monitoring of RAS Activity Using In Vitro and In-Cell NMR Spectroscopy...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 39
Posted By nmrlearner
Protocol to identify the ligand binding site of Mincle using NMR spectroscopy

Protocol to identify the ligand binding site of Mincle using NMR spectroscopy...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 41
Posted By nmrlearner
Assessment of monoclonal antibody glycosylation: a comparative study using HRMS, NMR, and HILIC-FLD

Assessment of monoclonal antibody glycosylation: a comparative study using HRMS, NMR, and HILIC-FLD...
Forum: Journal club 04-08-2024, 03:06 PM
Replies: 0
Views: 221
Posted By nmrlearner
Application of an NMR/crystallography fragment screening platform for the assessment and rapid discovery of new HIV-CA binding fragments

Application of an NMR/crystallography fragment screening platform for the assessment and rapid discovery of new HIV-CA binding fragments...
Forum: Online News 04-08-2024, 03:06 PM
Replies: 0
Views: 66
Posted By nmrlearner
Visualizing Side Chains of Invisible Protein Conformers by Solution NMR - ScienceDirect.com

Visualizing Side Chains of Invisible Protein Conformers by Solution NMR - ScienceDirect.com

Visualizing Side Chains of Invisible Protein Conformers by Solution NMR...
Forum: Online News 04-08-2024, 03:06 PM
Replies: 0
Views: 64
Posted By nmrlearner
NMR methods for exploring 'dark' states in ligand binding and protein-protein interactions - ScienceDirect.com

NMR methods for exploring 'dark' states in ligand binding and protein-protein interactions - ScienceDirect.com

NMR methods for exploring 'dark' states in ligand binding and protein-protein...
Forum: Online News 04-08-2024, 03:06 PM
Replies: 0
Views: 63
Posted By nmrlearner
NMR Structure of the ?-Hemoglobin Stabilizing Protein: INSIGHTS INTO CONFORMATIONAL HETEROGENEITY AND ... - ScienceDirect.com

NMR Structure of the ?-Hemoglobin Stabilizing Protein: INSIGHTS INTO CONFORMATIONAL HETEROGENEITY AND ... - ScienceDirect.com

NMR Structure of the ?-Hemoglobin Stabilizing Protein: INSIGHTS INTO...
Showing results 1 to 25 of 500

 
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