BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Search Forums
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR

Showing results 1 to 25 of 443
Search took 0.01 seconds.
Search: Threads Started By: NMRpipe Yahoo group news
  Thread / Thread Starter Last Post Replies Views Forum
Go to first new post [NMRpipe Yahoo group] 13C or 15N detected data
13C or 15N detected data Hi Pipers, I am probably talking about a very simple issue. I want to process a 13C (detected) -15N correlation in the solid state. The spectrum was recorded More...
NMRpipe Yahoo group news
07-11-2013 12:07 PM
by NMRpipe Yahoo group news Go to last post
0 605 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Post-doctoral position in protein NMR in Denmark
Post-doctoral position in protein NMR in Denmark Dear Colleagues, I have an opening for a 2-year post-doctoral position in the area of development and application of NMR spectroscopy to proteins. Please find More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 437 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Post-doctoral position in protein NMR in Denmark
Re: Post-doctoral position in protein NMR in Denmark Dear Colleagues, I have just acquired an interleaved 3D HNCO experiment on an Agilent (Varian) 600 MHz instrument. I would be much obliged if anyone of you More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 631 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] script for processing interleaved 3D experiment
script for processing interleaved 3D experiment Hello NMRPipe Community, I have a 3D data set (modified HNCO experiment for detection of Hydrogen bonding partners) wherein the reference and the H-bond More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 1,242 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] dimensionality reported in peak table not correct
dimensionality reported in peak table not correct Hi fellow nmrPipe users, I've run into an unexpected situation. The details are below. Thanks in advance for any suggestions. This is what I'm doing: 1) A More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 597 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] T1 pseudo3D data
T1 pseudo3D data Dear colleagues, I collected a T1 pseudo3D experiment containing 10 delays specified in the vd list. The data was collected using the loop set-up below. goscnp More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 518 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Volumes from nlinLS
Volumes from nlinLS Hi everyone, I am using peak volumes from fully relaxed HSQC spectra to get populations in a three-site slowly exchanging system. I am using nlinLS to get the More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 555 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: {Disarmed} Re: [nmrpipe] Re: Bruk2pipe with NUS data
Re: {Disarmed} Re: Re: Bruk2pipe with NUS data Hi Matthew, thanks for your explanation. I used my own script to convert the 2D conversion file in a 3D conversion file but now is much more clear to me what More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 489 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Re: Bruk2pipe with NUS data Hi All, Just as an added note, the latest NMRPipe schemes for 3D NUS data start by converting the FID as a 2D file, but with parameters filled in for all three More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 623 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Re: Bruk2pipe with NUS data Hi Marco, I too was confused at first that the bruker-->pipe conversion macro wasn't getting the details of the acquired data correct when the data is acquired More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 595 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: CH IPAP Processing
Re: CH IPAP Processing The IP/AP interleaving loop is the innermost one and the script works. Thank you so much! Yang More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 495 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: nmrDraw problem
Re: nmrDraw problem Idehara, T., et al. High power THz technologies using high frequency gyrotrons. in Infrared, Millimeter, and Terahertz Waves (IRMMW-THz), 2012 37th International Conference on. 2012. http://dx.doi.org/10.1109/IRMMW-THz.2012.6380408 Gyrotrons are extremely high power radiation sources even in THz frequency region comparing conventional radiation sources. We have developed gyrotron FU CW series for application to many high power THz technologies. Up to the present, nine CW gyrotrons were developed. Each gyrotron has its own objective and was optimized for...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 570 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Bruker NUS data processing using nmrPipe
Bruker NUS data processing using nmrPipe Dear nmrPipe users, * We just installed a new Bruker 700 with NUS package. A user collected a 3D data set, but could not process the data since the MDD More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 540 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] installing NMRPipe on Ubuntu 12.10
installing NMRPipe on Ubuntu 12.10 Hello, following execution of install.com, I receive an error message: failed to find software directory nmrbin.linux9 I specifiy the base directory as More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 623 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Bruker NUS data processing using nmrPipe
Re: Bruker NUS data processing using nmrPipe Hi Weidong, nmrPipe does not have MDD functionality to my knowledge, but it does have the capability of reconstructing spectra from non-uniformly sampled NMR More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 509 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Bruk2pipe with NUS data
Bruk2pipe with NUS data Hi all, I have a 3D acquired with Topspin 3.1 using 64 x 64 points for N15 and C13 reduced both to 25% with NUS. The strange thing happens with bruk2pipe that More...
NMRpipe Yahoo group news
05-15-2013 03:12 PM
by NMRpipe Yahoo group news Go to last post
0 592 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Post-doctoral position in protein NMR in Denmark
Re: Post-doctoral position in protein NMR in Denmark Dear Colleagues, I have just acquired an interleaved 3D HNCO experiment on an Agilent (Varian) 600 MHz instrument. I would be much obliged if anyone of you More...
NMRpipe Yahoo group news
05-06-2013 11:24 AM
by NMRpipe Yahoo group news Go to last post
0 586 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] script for processing interleaved 3D experiment
script for processing interleaved 3D experiment Hello NMRPipe Community, I have a 3D data set (modified HNCO experiment for detection of Hydrogen bonding partners) wherein the reference and the H-bond More...
NMRpipe Yahoo group news
05-06-2013 11:24 AM
by NMRpipe Yahoo group news Go to last post
0 808 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] dimensionality reported in peak table not correct
dimensionality reported in peak table not correct Hi fellow nmrPipe users, I've run into an unexpected situation. The details are below. Thanks in advance for any suggestions. This is what I'm doing: 1) A More...
NMRpipe Yahoo group news
04-11-2013 09:27 PM
by NMRpipe Yahoo group news Go to last post
0 578 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] T1 pseudo3D data
T1 pseudo3D data Dear colleagues, I collected a T1 pseudo3D experiment containing 10 delays specified in the vd list. The data was collected using the loop set-up below. goscnp More...
NMRpipe Yahoo group news
04-04-2013 08:45 AM
by NMRpipe Yahoo group news Go to last post
0 589 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Volumes from nlinLS
Volumes from nlinLS Hi everyone, I am using peak volumes from fully relaxed HSQC spectra to get populations in a three-site slowly exchanging system. I am using nlinLS to get the More...
NMRpipe Yahoo group news
03-27-2013 03:03 AM
by NMRpipe Yahoo group news Go to last post
0 552 News from other NMR forums
Go to first new post Post-doctoral position in protein NMR in Denmark
Post-doctoral position in protein NMR in Denmark Dear Colleagues, I have an opening for a 2-year post-doctoral position in the area of development and application of NMR spectroscopy to proteins. Please find More...
NMRpipe Yahoo group news
03-21-2013 02:58 PM
by NMRpipe Yahoo group news Go to last post
0 909 Job marketplace
Go to first new post [NMRpipe Yahoo group] Re: {Disarmed} Re: [nmrpipe] Re: Bruk2pipe with NUS data
Re: {Disarmed} Re: Re: Bruk2pipe with NUS data Hi Matthew, thanks for your explanation. I used my own script to convert the 2D conversion file in a 3D conversion file but now is much more clear to me what More...
NMRpipe Yahoo group news
03-07-2013 06:54 PM
by NMRpipe Yahoo group news Go to last post
0 659 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Re: Bruk2pipe with NUS data Hi Marco, I too was confused at first that the bruker-->pipe conversion macro wasn't getting the details of the acquired data correct when the data is acquired More...
NMRpipe Yahoo group news
03-07-2013 05:38 AM
by NMRpipe Yahoo group news Go to last post
0 610 News from other NMR forums
Go to first new post [NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Re: Bruk2pipe with NUS data Hi All, Just as an added note, the latest NMRPipe schemes for 3D NUS data start by converting the FID as a 2D file, but with parameters filled in for all three More...
NMRpipe Yahoo group news
03-07-2013 05:38 AM
by NMRpipe Yahoo group news Go to last post
0 498 News from other NMR forums
Showing results 1 to 25 of 443

 
Forum Jump


BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 01:15 AM.


Map