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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR
Page 1 of 18 1 2311 > Last »
Showing results 1 to 25 of 443
Search took 0.03 seconds. Search: Posts Made By: NMRpipe Yahoo group news
Forum: News from other NMR forums 07-11-2013, 12:07 PM
Replies: 0
[NMRpipe Yahoo group] 13C or 15N detected data
Views: 607
Posted By NMRpipe Yahoo group news
13C or 15N detected data

13C or 15N detected data (http://groups.yahoo.com/group/nmrpipe/message/2525)

Hi Pipers, I am probably talking about a very simple issue. I want to process a 13C (detected) -15N correlation in the...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 440
Posted By NMRpipe Yahoo group news
Post-doctoral position in protein NMR in Denmark

Post-doctoral position in protein NMR in Denmark (http://groups.yahoo.com/group/nmrpipe/message/2519)

Dear Colleagues, I have an opening for a 2-year post-doctoral position in the area of...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 633
Posted By NMRpipe Yahoo group news
Re: Post-doctoral position in protein NMR in Denmark

Re: Post-doctoral position in protein NMR in Denmark (http://groups.yahoo.com/group/nmrpipe/message/2524)

Dear Colleagues, I have just acquired an interleaved 3D HNCO experiment on an Agilent...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 1,246
Posted By NMRpipe Yahoo group news
script for processing interleaved 3D experiment

script for processing interleaved 3D experiment (http://groups.yahoo.com/group/nmrpipe/message/2523)

Hello NMRPipe Community, I have a 3D data set (modified HNCO experiment for detection of...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 598
Posted By NMRpipe Yahoo group news
dimensionality reported in peak table not correct

dimensionality reported in peak table not correct (http://groups.yahoo.com/group/nmrpipe/message/2522)

Hi fellow nmrPipe users, I've run into an unexpected situation. The details are below. ...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] T1 pseudo3D data
Views: 519
Posted By NMRpipe Yahoo group news
T1 pseudo3D data

T1 pseudo3D data (http://groups.yahoo.com/group/nmrpipe/message/2521)

Dear colleagues, I collected a T1 pseudo3D experiment containing 10 delays specified in the vd list. The data was collected...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] Volumes from nlinLS
Views: 558
Posted By NMRpipe Yahoo group news
Volumes from nlinLS

Volumes from nlinLS (http://groups.yahoo.com/group/nmrpipe/message/2520)

Hi everyone, I am using peak volumes from fully relaxed HSQC spectra to get populations in a three-site slowly exchanging...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 492
Posted By NMRpipe Yahoo group news
Re: {Disarmed} Re: [nmrpipe] Re: Bruk2pipe with NUS data

Re: {Disarmed} Re: [nmrpipe] Re: Bruk2pipe with NUS data (http://groups.yahoo.com/group/nmrpipe/message/2518)

Hi Matthew, thanks for your explanation. I used my own script to convert the 2D...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Views: 625
Posted By NMRpipe Yahoo group news
Re: Bruk2pipe with NUS data

Re: Bruk2pipe with NUS data (http://groups.yahoo.com/group/nmrpipe/message/2517)

Hi All, Just as an added note, the latest NMRPipe schemes for 3D NUS data start by converting the FID as a 2D file,...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Views: 598
Posted By NMRpipe Yahoo group news
Re: Bruk2pipe with NUS data

Re: Bruk2pipe with NUS data (http://groups.yahoo.com/group/nmrpipe/message/2516)

Hi Marco, I too was confused at first that the bruker-->pipe conversion macro wasn't getting the details of the...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] Re: CH IPAP Processing
Views: 497
Posted By NMRpipe Yahoo group news
Re: CH IPAP Processing

Re: CH IPAP Processing (http://groups.yahoo.com/group/nmrpipe/message/2510)

The IP/AP interleaving loop is the innermost one and the script works. Thank you so much! Yang

More......
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] Bruk2pipe with NUS data
Views: 595
Posted By NMRpipe Yahoo group news
Bruk2pipe with NUS data

Bruk2pipe with NUS data (http://groups.yahoo.com/group/nmrpipe/message/2515)

Hi all, I have a 3D acquired with Topspin 3.1 using 64 x 64 points for N15 and C13 reduced both to 25% with NUS. The...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 511
Posted By NMRpipe Yahoo group news
Re: Bruker NUS data processing using nmrPipe

Re: Bruker NUS data processing using nmrPipe (http://groups.yahoo.com/group/nmrpipe/message/2514)

Hi Weidong, nmrPipe does not have MDD functionality to my knowledge, but it does have the...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] installing NMRPipe on Ubuntu 12.10
Views: 626
Posted By NMRpipe Yahoo group news
installing NMRPipe on Ubuntu 12.10

installing NMRPipe on Ubuntu 12.10 (http://groups.yahoo.com/group/nmrpipe/message/2513)

Hello, following execution of install.com, I receive an error message: failed to find software directory...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
Views: 542
Posted By NMRpipe Yahoo group news
Bruker NUS data processing using nmrPipe

Bruker NUS data processing using nmrPipe (http://groups.yahoo.com/group/nmrpipe/message/2512)

Dear nmrPipe users, * We just installed a new Bruker 700 with NUS package. A user collected a 3D data...
Forum: News from other NMR forums 05-15-2013, 03:12 PM
Replies: 0
[NMRpipe Yahoo group] Re: nmrDraw problem
Views: 574
Posted By NMRpipe Yahoo group news
Re: nmrDraw problem

Re: nmrDraw problem (http://groups.yahoo.com/group/nmrpipe/message/2511)

Idehara, T., et al. High power THz technologies using high frequency gyrotrons. in Infrared, Millimeter, and Terahertz...
Forum: News from other NMR forums 05-06-2013, 11:24 AM
Replies: 0
Views: 810
Posted By NMRpipe Yahoo group news
script for processing interleaved 3D experiment

script for processing interleaved 3D experiment (http://tech.groups.yahoo.com/group/nmrpipe/message/2523)

Hello NMRPipe Community, I have a 3D data set (modified HNCO experiment for detection of...
Forum: News from other NMR forums 05-06-2013, 11:24 AM
Replies: 0
Views: 587
Posted By NMRpipe Yahoo group news
Re: Post-doctoral position in protein NMR in Denmark

Re: Post-doctoral position in protein NMR in Denmark (http://tech.groups.yahoo.com/group/nmrpipe/message/2524)

Dear Colleagues, I have just acquired an interleaved 3D HNCO experiment on an Agilent...
Forum: News from other NMR forums 04-11-2013, 09:27 PM
Replies: 0
Views: 579
Posted By NMRpipe Yahoo group news
dimensionality reported in peak table not correct

dimensionality reported in peak table not correct (http://tech.groups.yahoo.com/group/nmrpipe/message/2522)

Hi fellow nmrPipe users, I've run into an unexpected situation. The details are below. ...
Forum: News from other NMR forums 04-04-2013, 08:45 AM
Replies: 0
[NMRpipe Yahoo group] T1 pseudo3D data
Views: 591
Posted By NMRpipe Yahoo group news
T1 pseudo3D data

T1 pseudo3D data (http://tech.groups.yahoo.com/group/nmrpipe/message/2521)

Dear colleagues, I collected a T1 pseudo3D experiment containing 10 delays specified in the vd list. The data was...
Forum: News from other NMR forums 03-27-2013, 03:03 AM
Replies: 0
[NMRpipe Yahoo group] Volumes from nlinLS
Views: 553
Posted By NMRpipe Yahoo group news
Volumes from nlinLS

Volumes from nlinLS (http://tech.groups.yahoo.com/group/nmrpipe/message/2520)

Hi everyone, I am using peak volumes from fully relaxed HSQC spectra to get populations in a three-site slowly...
Forum: Job marketplace 03-21-2013, 02:58 PM
Replies: 0
Views: 910
Posted By NMRpipe Yahoo group news
Post-doctoral position in protein NMR in Denmark

Post-doctoral position in protein NMR in Denmark (http://tech.groups.yahoo.com/group/nmrpipe/message/2519)

Dear Colleagues, I have an opening for a 2-year post-doctoral position in the area of...
Forum: News from other NMR forums 03-07-2013, 06:54 PM
Replies: 0
Views: 661
Posted By NMRpipe Yahoo group news
Re: {Disarmed} Re: [nmrpipe] Re: Bruk2pipe with NUS data

Re: {Disarmed} Re: [nmrpipe] Re: Bruk2pipe with NUS data (http://tech.groups.yahoo.com/group/nmrpipe/message/2518)

Hi Matthew, thanks for your explanation. I used my own script to convert the 2D...
Forum: News from other NMR forums 03-07-2013, 05:38 AM
Replies: 0
[NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Views: 499
Posted By NMRpipe Yahoo group news
Re: Bruk2pipe with NUS data

Re: Bruk2pipe with NUS data (http://tech.groups.yahoo.com/group/nmrpipe/message/2517)

Hi All, Just as an added note, the latest NMRPipe schemes for 3D NUS data start by converting the FID as a 2D...
Forum: News from other NMR forums 03-07-2013, 05:38 AM
Replies: 0
[NMRpipe Yahoo group] Re: Bruk2pipe with NUS data
Views: 612
Posted By NMRpipe Yahoo group news
Re: Bruk2pipe with NUS data

Re: Bruk2pipe with NUS data (http://tech.groups.yahoo.com/group/nmrpipe/message/2516)

Hi Marco, I too was confused at first that the bruker-->pipe conversion macro wasn't getting the details of...
Showing results 1 to 25 of 443
Page 1 of 18 1 2311 > Last »

 
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