Using Light To Build Bridges In Cells - Asian Scientist Magazine

		BioNMR > NMR community > Online News
Using Light To Build Bridges In Cells - Asian Scientist Magazine

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

08-29-2017, 05:35 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,187

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Using Light To Build Bridges In Cells - Asian Scientist Magazine

Asian Scientist Magazine

Using Light To Build Bridges In Cells
Asian Scientist Magazine
Nuclear magnetic resonance analysis and molecular dynamics simulation showed that in the dark state, the PB domain docked at two negatively charged pockets within the light-responsive protein called LOV2. When LOV2 is exposed to light, it changes ...

Using Light To Build Bridges In Cells - Asian Scientist Magazine
More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
[NMR paper] Probing pattern and dynamics of disulfide bridges using synthesis and NMR of an ion channel blocker peptide toxin with multiple diselenide bonds. Probing pattern and dynamics of disulfide bridges using synthesis and NMR of an ion channel blocker peptide toxin with multiple diselenide bonds. Related Articles Probing pattern and dynamics of disulfide bridges using synthesis and NMR of an ion channel blocker peptide toxin with multiple diselenide bonds. Chem Sci. 2016 Apr 21;7(4):2666-2673 Authors: Fehér K, Timári I, Rákosi K, Szolomájer J, Illyés TZ, Bartok A, Varga Z, Panyi G, Tóth GK, Kövér KE Abstract Anuroctoxin (AnTx), a 35-amino-acid scorpion toxin containing four...	nmrlearner	Journal club	0	07-03-2017 02:31 AM
Scientists discover exactly how superbugs build up resistance to antibiotics - Daily Mail http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcSS9XxebHtKAoq5eBuQuMrkVB7UTWex0_QHJsbLSes4nOuDgpViGjS86lKdESWuqthvPleBQ3Y Daily Mail <img alt="" height="1" width="1"> Scientists discover exactly how superbugs build up resistance to antibiotics Daily Mail A recent Â£17 million investment in some of the best nuclear magnetic resonance and electron microscopy facilities in the world is now enabling scientists to remain at the forefront of research into complex proteins. A new academic symposium, the ... Unravelling the secret of antibiotic resistancePhys.Org all 7 news articles...	nmrlearner	Online News	0	03-23-2016 03:42 AM
GYSS 2014: Start Companies For The Right Reasons, Say Eminent Scientists - Asian Scientist Magazine http://www.bionmr.com//t1.gstatic.com/images?q=tbn:ANd9GcQdVTRevy82Y4mWlKh6NCv0GYQe12tEGaYR_fdZeXjzmV2cw29UmaQlVgMluVGikG0F-ZMslr0 Asian Scientist Magazine <img alt="" height="1" width="1" /> GYSS 2014: Start Companies For The Right Reasons, Say Eminent Scientists Asian Scientist Magazine WÃ¼thrich, who invented nuclear magnetic resonance, a technique that allows researchers to work out the structures of proteins, said that it used to be considered in bad taste to mix science with business. â??Things have changed very much todayâ?¦ a ... GYSS 2014: Start Companies For The Right...	nmrlearner	Online News	0	01-28-2014 11:53 AM
Team Effort - R&D Magazine - R & D Magazine http://www.bionmr.com//nt1.ggpht.com/news/tbn/XZPfJpqPu06j9M/6.jpg R & D Magazine <img alt="" height="1" width="1" /> Team Effort - R&D Magazine R & D Magazine To achieve the best understanding of protein structure, researchers often look to nuclear magnetic resonance (NMR) and X-ray diffraction (XRD) techniques. High-powered X-rays have led to a host of fundamental discoveries in biology. However, the ... Team Effort - R&D Magazine - R & D Magazine	nmrlearner	Online News	0	04-24-2013 09:48 PM
[Question from NMRWiki Q&A forum] How do you build an NMR power amplifier? How do you build an NMR power amplifier? And how to you match it to the NMR coil? Basically I'm looking to perform NMR experiments with frequencies in the 500KHZ region. I already have an arbitrary function generator that I can program with the required pulses at that frequency, now I need to amplifier the signal, and deliver the current to a coil. How do build an amplifier that can drive a lot of current into a coil at that frequency? Do I resonate the coil with a capacitor, and if so, how do I ensure the resulting circuit won't ring, and ruin the pulse sequences? ...	nmrlearner	News from other NMR forums	0	11-24-2011 02:49 PM
[CNS Yahoo group] How to build N-terminal PCA? How to build N-terminal PCA? Hi, all~ I have got a problem on building the N-terminal pyroglutamic acid (PCA). I'm afraid I have successfully defined .top, .param and *.link files of More...	nmrlearner	News from other NMR forums	0	07-27-2011 11:24 AM
[KPWU blog] Find salt bridges quickly using VMD Find salt bridges quickly using VMD My colleagues asked me to know if they can use PyMol to quickly find information of salt bridges in their working proteins. It seems there is no simple pymol script to do such purpose (at least I can’t find it). I tried writing a shell scripts to extract coordinates from all negative (Glu, Asp) and http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=314&subd=kpwu&ref=&feed=1 Go to KPWU blog to read complete post.	nmrlearner	News from NMR blogs	0	04-09-2011 12:17 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off