BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 05-08-2013, 02:49 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,137
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default A trick to fold proteins more quickly - PhysOrg.com - Phys.Org



A trick to fold proteins more quickly - PhysOrg.com
Phys.Org
"We exploit the experimental data obtained observing the proteins through nuclear magnetic resonance, and use them to create restraints to be applied to the model", explained Laio, who has coordinated the research published in Proceedings of the ...



A trick to fold proteins more quickly - PhysOrg.com - Phys.Org
More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
A trick to fold proteins more quickly: 'Clever' technique speeds up the ... - Science Daily (press release)
<img alt="" height="1" width="1" /> A trick to fold proteins more quickly: 'Clever' technique speeds up the ... Science Daily (press release) "We exploit the experimental data obtained observing the proteins through nuclear magnetic resonance, and use them to create restraints to be applied to the model," explained Laio, who has coordinated the research published in Proceedings of the ... and more &raquo; A trick to fold proteins more quickly: 'Clever' technique speeds up the ... - Science Daily (press release) More...
nmrlearner Online News 0 05-08-2013 02:49 PM
Intrinsically disordered proteins: A conversation with Rohit Pappu - Phys.Org
Intrinsically disordered proteins: A conversation with Rohit Pappu - Phys.Org <img alt="" height="1" width="1" /> Intrinsically disordered proteins: A conversation with Rohit Pappu Phys.Org The earliest clue was that some protein segments didn't show up in X-ray crystallography or NMR studies, the standard ways of studying protein structure. By the 1990s people who studied how proteins interact with DNA had noticed the proteins often ... and more &raquo; Read here
nmrlearner Online News 0 09-20-2012 06:36 PM
Speeding up drug discovery with rapid 3-D mapping of proteins - Phys.Org
<img alt="" height="1" width="1" /> Speeding up drug discovery with rapid 3-D mapping of proteins Phys.Org These amino acids gave off telltale structural clues when analyzed with nuclear magnetic resonance spectroscopy, a method for using the magnetic properties of atoms to determine a molecule's physical and chemical properties. "It was very difficult and ... and more &raquo; Speeding up drug discovery with rapid 3-D mapping of proteins - Phys.Org More...
nmrlearner Online News 0 05-30-2012 03:00 PM
Fold it: Solid-state NMR unravels proteins - spectroscopyNOW.com
Fold it: Solid-state NMR unravels proteins - spectroscopyNOW.com <img alt="" height="1" width="1" /> Fold it: Solid-state NMR unravels proteins spectroscopyNOW.com Researchers have developed a novel solid-state NMR spectroscopic method that uses paramagnetic tags to help them visualize the shape of protein molecules. The technique could be used to help scientists understand the properties of various biological ... Read here
nmrlearner Online News 0 04-01-2012 03:58 PM
Fold it: Solid-state NMR unravels proteins
Fold it: Solid-state NMR unravels proteins Researchers have developed a novel solid-state NMR spectroscopic method that uses paramagnetic tags to help them visualize the shape of protein molecules. The technique could be used to help scientists understand the properties of various biological molecules under normal, healthy conditions and also in those that are involved in a range of diseases. Source: Spectroscopynow.com
nmrlearner General 0 04-01-2012 03:58 PM
A new tool to reveal structure of proteins - PhysOrg.com
A new tool to reveal structure of proteins - PhysOrg.com <img alt="" height="1" width="1" /> A new tool to reveal structure of proteins PhysOrg.com For roughly a decade, a technique called solid state nuclear magnetic resonance (NMR) spectroscopy has allowed researchers to detect the arrangements of atoms in proteins that defy study by traditional laboratory tools such as X-ray crystallography. and more &raquo; Read here
nmrlearner Online News 0 03-26-2012 07:34 PM
[KPWU blog] Find salt bridges quickly using VMD
Find salt bridges quickly using VMD My colleagues asked me to know if they can use PyMol to quickly find information of salt bridges in their working proteins. It seems there is no simple pymol script to do such purpose (at least I can’t find it). I tried writing a shell scripts to extract coordinates from all negative (Glu, Asp) and http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=314&subd=kpwu&ref=&feed=1 Go to KPWU blog to read complete post.
nmrlearner News from NMR blogs 0 04-09-2011 12:17 AM
[NMR paper] An approach to global fold determination using limited NMR data from larger proteins
An approach to global fold determination using limited NMR data from larger proteins selectively protonated at specific residue types. An approach to global fold determination using limited NMR data from larger proteins selectively protonated at specific residue types. J Biomol NMR. 1996 Oct;8(3):360-8 Authors: Smith BO, Ito Y, Raine A, Teichmann S, Ben-Tovim L, Nietlispach D, Broadhurst RW, Terada T, Kelly M, Oschkinat H, Shibata T, Yokoyama S, Laue ED A combination of calculation and experiment is used to demonstrate that the global fold of...
nmrlearner Journal club 0 08-22-2010 02:20 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 03:30 PM.


Map