Trial and error help researchers design large 'ideal' proteins - The Science Board

		BioNMR > NMR community > Online News
Trial and error help researchers design large 'ideal' proteins - The Science Board

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

07-03-2021, 08:12 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,184

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Trial and error help researchers design large 'ideal' proteins - The Science Board

Trial and error help researchers design large 'ideal' proteins - The Science Board

Trial and error help researchers design large 'ideal' proteins The Science Board Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Designing Large “Ideal” Proteins from Scratch - Genetic Engineering & Biotechnology News Designing Large “Ideal” Proteins from Scratch - Genetic Engineering & Biotechnology News Designing Large “Ideal” Proteins from Scratch Genetic Engineering & Biotechnology News Read here	nmrlearner	Online News	0	07-03-2021 08:12 PM
Google's DeepMind makes a quantum leap in solving the protein folding problem - The Science Board Google's DeepMind makes a quantum leap in solving the protein folding problem - The Science Board Google's DeepMind makes a quantum leap in solving the protein folding problem The Science Board Read here	nmrlearner	Online News	0	12-12-2020 06:54 PM
Chemists unveil the structure of an influenza B protein: Findings could help researchers design drugs to treat influenza B infections. - Science Daily Chemists unveil the structure of an influenza B protein: Findings could help researchers design drugs to treat influenza B infections. - Science Daily Chemists unveil the structure of an influenza B protein: Findings could help researchers design drugs to treat influenza B infections. Science Daily Read here	nmrlearner	Online News	0	03-25-2020 08:42 AM
'Reading' proteins for new properties: Researchers can now translate patterns to determine how a protein will condense during phase separation - Science Daily 'Reading' proteins for new properties: Researchers can now translate patterns to determine how a protein will condense during phase separation Science Daily 'Reading' proteins for new properties: Researchers can now translate patterns to determine how a protein will condense during phase separation - Science Daily More...	nmrlearner	Online News	0	02-29-2020 09:52 PM
Researchers discovered that how proteins wiggle, jiggle, and shape-shift by the hour is central to figuring out how ... - Science Daily Researchers discovered that how proteins wiggle, jiggle, and shape-shift by the hour is central to figuring out how ... - Science Daily <img alt="" height="1" width="1"> Researchers discovered that how proteins wiggle, jiggle, and shape-shift by the hour is central to figuring out how ... Science Daily Researchers made a solution of these proteins and adenosine triphosphate (ATP), food for the proteins, to create a circadian clock that functioned for weeks. LiWang's structural biology lab uses nuclear magnetic resonance (NMR) spectroscopy, the parent ... and more » Read here	nmrlearner	Online News	0	02-19-2018 08:25 AM
Researchers probe brain disease-causing proteins at the atomic ... - Science Daily Researchers probe brain disease-causing proteins at the atomic ... - Science Daily <img alt="" height="1" width="1"> Researchers probe brain disease-causing proteins at the atomic ... Science Daily Researchers studying a protein that causes a hereditary degenerative brain disease in humans have discovered that the human, mouse and hamster forms of ... and more » Read here	nmrlearner	Online News	0	11-07-2017 07:58 AM
Large, medically important class of proteins starts to yield its secrets - Eureka! Science News Large, medically important class of proteins starts to yield its secrets - Eureka! Science News http://www.bionmr.com//nt0.ggpht.com/news/tbn/nP87yVy76N4T0M/6.jpg Eureka! Science News <img alt="" height="1" width="1" /> Large, medically important class of proteins starts to yield its secrets Eureka! Science News Such NMR structure studies were pioneered by WÃ¼thrichand one of the recent innovations has been the use of "microcoils" to enable NMR studies of minute quantities of precious protein samples in solution. WÃ¼thrich's lab, in collaboration with the ... and more »	nmrlearner	Online News	0	07-13-2012 09:15 AM
Researchers closer to understanding how proteins regulate immune system - Eureka! Science News Researchers closer to understanding how proteins regulate immune system - Eureka! Science News <img alt="" height="1" width="1" /> Researchers closer to understanding how proteins regulate immune system Eureka! Science News Using powerful magnets and a technique called nuclear magnetic resonance (NMR) spectroscopy, Gifford and Vogel determined the molecular structure of the interaction between the two proteins, providing important insight at the molecular level into how ... and more » Read here	nmrlearner	Online News	0	07-04-2012 01:08 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off