BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 05-11-2015, 09:06 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,134
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default A tale of two roads into protein unfolding - Phys.Org


Phys.Org


A tale of two roads into protein unfolding
Phys.Org
Using nuclear magnetic resonance spectroscopy, a technique that provides detailed information on the structure, composition, state, and chemical environment of molecules, and small-angle X-ray scattering, which informs on the shape and size of ...



A tale of two roads into protein unfolding - Phys.Org
More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Inside a high-stakes experiment in protein crystallization - Phys.Org
http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcSsnEcoCnepnd9skaW94U5s7K2-sirQfRrrrYBf7Vwiu9X14Ymys_kbXQkaX4upRtYx74nEeMU Phys.Org <img alt="" height="1" width="1"> Inside a high-stakes experiment in protein crystallization Phys.Org (The other is nuclear magnetic resonance spectroscopy.) Crystallography starts with crystalsâ??comprising hundreds of thousands of protein molecules, packed together like a three-dimensional wall of bricks. By bombarding a crystal with X-rays, and using ... Inside a high-stakes experiment in protein crystallization - Phys.Org
nmrlearner Online News 0 04-15-2015 01:30 AM
Researcher among best in protein modeling contests - Phys.Org
Researcher among best in protein modeling contests - Phys.Org http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcQSlx694T61BoCaeKqyRR6QpXhWdpwgzkYKwLN94OV36EK6UX_U8E1jX8t2X9yG1IMz8IjVKafP Phys.Org <img alt="" height="1" width="1"> Researcher among best in protein modeling contests Phys.Org Kihara's work, called protein structure prediction, could shave years off of drug development and other work that depends on understanding protein structure and function. It also plays into the field of artificial protein design, where the future may ... and more &raquo;
nmrlearner Online News 0 03-30-2015 06:04 PM
Protein courtship revealed through chemist's lens - Phys.Org
Protein courtship revealed through chemist's lens - Phys.Org http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcQOKCXJUFn8JH3Fz7hNm0PQ2S3jQHg3sKDkrUjJ5Zd1vybPn96ocPBvEQrkW9nsxo85DzxQn7Ed Phys.Org <img alt="" height="1" width="1" /> Protein courtship revealed through chemist's lens Phys.Org But changes in the protein NMR spectra are small and weak, so finding out whether the trick worked wasn't straightforward. "At first, we didn't know what we were looking at. It appeared to us as uncertainty in the data, and it was extremely time ... and more &raquo;
nmrlearner Online News 0 09-15-2014 07:13 PM
Measuring modified protein structures - Phys.Org
<img alt="" height="1" width="1" /> Measuring modified protein structures Phys.Org Although there is a series of techniques to study structurally modified proteins, such as x-ray crystallography, nuclear magnetic resonance spectroscopy and other spectroscopic techniques, they cannot be used to analyse complex biological samples. and more &raquo; Measuring modified protein structures - Phys.Org More...
nmrlearner Online News 0 09-15-2014 06:51 AM
New player emerges in mapping protein structures - Phys.Org
<img alt="" height="1" width="1" /> New player emerges in mapping protein structures Phys.Org Scientists also use nuclear magnetic resonance imaging to solve structures. And coming in at a distant third is a technique called single-particle cryoelectron microscopy (cryo-EM), in which a macromolecule is immobilized in a thin film of vitrified ... and more &raquo; New player emerges in mapping protein structures - Phys.Org More...
nmrlearner Online News 0 09-20-2013 02:39 PM
Mapping of unfolding states of integral helical membrane proteins by GPS-NMR and scattering techniques: TFE-induced unfolding of KcsA in DDM surfactant
Mapping of unfolding states of integral helical membrane proteins by GPS-NMR and scattering techniques: TFE-induced unfolding of KcsA in DDM surfactant September 2012 Publication year: 2012 Source:Biochimica et Biophysica Acta (BBA) - Biomembranes, Volume 1818, Issue 9</br> </br> Membrane proteins are vital for biological function, and their action is governed by structural properties critically depending on their interactions with the membranes. This has motivated considerable interest in studies of membrane protein folding and unfolding. Here the structural changes...
nmrlearner Journal club 0 02-03-2013 10:13 AM
[NMR paper] Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate reveal
Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering. Related Articles Mechanical unfolding of a titin Ig domain: structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering. J Mol Biol. 2002 Sep 27;322(4):841-9 Authors: Fowler SB, Best RB, Toca Herrera JL, Rutherford TJ, Steward A, Paci E, Karplus M, Clarke J The mechanical unfolding of an immunoglobulin domain from the...
nmrlearner Journal club 0 11-24-2010 08:58 PM
[NMR paper] NMR studies of the pbx1 TALE homeodomain protein free in solution and bound to DNA: p
NMR studies of the pbx1 TALE homeodomain protein free in solution and bound to DNA: proposal for a mechanism of HoxB1-Pbx1-DNA complex assembly. Related Articles NMR studies of the pbx1 TALE homeodomain protein free in solution and bound to DNA: proposal for a mechanism of HoxB1-Pbx1-DNA complex assembly. J Mol Biol. 1999 Aug 20;291(3):521-30 Authors: Jabet C, Gitti R, Summers MF, Wolberger C The Hox homeodomain proteins are transcription factors involved in developmental regulation. Many of the vertebrate Hox proteins bind DNA cooperatively...
nmrlearner Journal club 0 11-18-2010 08:31 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 11:16 AM.


Map