BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 05-01-2017, 12:52 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 17,582
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default NMR reveals entropy redistribution: Bacterial proteins - spectroscopyNOW.com

NMR reveals entropy redistribution: Bacterial proteins - spectroscopyNOW.com


spectroscopyNOW.com


NMR reveals entropy redistribution: Bacterial proteins
spectroscopyNOW.com
Research carried out at the of the METACyt Biomolecular NMR Laboratory at Indiana University Bloomington has revealed evidence that tiny changes in atomic movements in bacterial proteins can play a big role in how these microorganisms function and ...


Read here
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] Conformational Entropy from NMR Relaxation in Proteins: the SRLS Perspective.
Conformational Entropy from NMR Relaxation in Proteins: the SRLS Perspective. Related Articles Conformational Entropy from NMR Relaxation in Proteins: the SRLS Perspective. J Phys Chem B. 2017 Jan 06;: Authors: Tchaicheeyan O, Meirovitch E Abstract Conformational entropy changes associated with bond-vector motions in proteins contribute to the free energy of ligand binding. To derive such contributions we apply the slowly relaxing local structure (SRLS) approach to NMR relaxation from (15)N-H bonds or C-CDH2 moieties of several...
nmrlearner Journal club 0 01-07-2017 01:27 PM
Motion and Conformational Entropy in Protein Function: Creation of an NMR-Based Entropy Meter
Motion and Conformational Entropy in Protein Function: Creation of an NMR-Based Entropy Meter Publication date: 27 January 2015 Source:Biophysical Journal, Volume 108, Issue 2, Supplement 1</br> Author(s): Vignesh Kasinath , Kyle W. Harpole , Veronica R. Moorman , Kathleen G. Valentine , Kendra K. Frederick , Kim A. Sharp , Joshua Wand</br> </br></br> </br></br> More...
nmrlearner Journal club 0 01-28-2015 05:28 PM
Dancing proteins: HIV targets - spectroscopyNOW.com
Dancing proteins: HIV targets - spectroscopyNOW.com <img alt="" height="1" width="1" /> Dancing proteins: HIV targets spectroscopyNOW.com New targets for preventative therapies of HIV infection might now be possible thanks to new studies that reveal the 'dance' of HIV proteins on the surface of the virus that are thought to be involved in the infection of human immune cells. Single ... and more &raquo; Read here
nmrlearner Online News 0 11-19-2014 04:31 AM
NMR-monitored titration of acid-stress bacterial chaperone HdeA reveals that Asp and Glu charge neutralization produces a loosened dimer structure in preparation for protein unfolding and chaperone activation
NMR-monitored titration of acid-stress bacterial chaperone HdeA reveals that Asp and Glu charge neutralization produces a loosened dimer structure in preparation for protein unfolding and chaperone activation Abstract HdeA is a periplasmic chaperone found in several gram-negative pathogenic bacteria that are linked to millions of cases of dysentery per year worldwide. After the protein becomes activated at low pH, it can bind to other periplasmic proteins, protecting them from aggregation when the bacteria travel through the stomach on their way to colonize the intestines. It has been...
nmrlearner Journal club 0 12-24-2013 01:04 PM
NMR advance brings proteins into the open - spectroscopyNOW.com
<img alt="" height="1" width="1" /> NMR advance brings proteins into the open spectroscopyNOW.com A key protein interaction, common across all forms of life, had eluded scientists' observation until a team of researchers cracked the case by combining data from four different techniques of nuclear magnetic resonance spectroscopy. Providence, R.I ... NMR advance brings proteins into the open - spectroscopyNOW.com More...
nmrlearner Online News 0 06-26-2013 09:39 AM
Fold it: Solid-state NMR unravels proteins - spectroscopyNOW.com
Fold it: Solid-state NMR unravels proteins - spectroscopyNOW.com <img alt="" height="1" width="1" /> Fold it: Solid-state NMR unravels proteins spectroscopyNOW.com Researchers have developed a novel solid-state NMR spectroscopic method that uses paramagnetic tags to help them visualize the shape of protein molecules. The technique could be used to help scientists understand the properties of various biological ... Read here
nmrlearner Online News 0 04-01-2012 03:58 PM
Herpes 3D: NMR reveals viral protein hijacking - spectroscopyNOW.com
Herpes 3D: NMR reveals viral protein hijacking - spectroscopyNOW.com <img alt="" height="1" width="1" /> Herpes 3D: NMR reveals viral protein hijacking spectroscopyNOW.com UK scientists have used solution-state NMR spectroscopy for the first time to develop a 3D picture of a herpes virus protein interacting with a key part of ... Read here
nmrlearner Online News 0 01-15-2011 02:09 AM
[NMR paper] Insights into the local residual entropy of proteins provided by NMR relaxation.
Insights into the local residual entropy of proteins provided by NMR relaxation. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www3.interscience.wiley.com-aboutus-images-wiley_interscience_pubmed_logo_FREE_120x27.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles Insights into the local residual entropy of proteins provided by NMR relaxation. Protein Sci. 1996 Dec;5(12):2647-50 Authors: Li Z, Raychaudhuri S, Wand AJ A simple model is used to...
nmrlearner Journal club 0 08-22-2010 02:20 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2017, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 03:54 AM.


Map