BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > Online News
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 02-08-2015, 01:21 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 18,793
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Diamonds defects reveal complex protein structures - RedOrbit


RedOrbit


Diamonds defects reveal complex protein structures
RedOrbit
Efforts to decode the molecular structure of proteins have mostly used X-ray crystallography, transmission electron microscopy, or nuclear magnetic resonance. But all of these methods require large sample volumes ā?? for example, X-ray diffraction ...



Diamonds defects reveal complex protein structures - RedOrbit
More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Diamonds could help bring proteins into focus - R & D Magazine
http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcTK3tXiZyOpAYyVIbUUPxBGPUOgU_LJpplmqxLAtebzsWiTUtzTOaFT2rd6u9SNxqzyCw-vfw R & D Magazine <img alt="" height="1" width="1"> Diamonds could help bring proteins into focus R & D Magazine Efforts to decode the molecular structure of proteins have mostly used x-ray crystallography, transmission electron microscopy, or nuclear magnetic resonance. But all of these methods require large sample volumesā??for example, x-ray diffraction ... and more &raquo; Diamonds could help bring proteins into focus - R & D Magazine
nmrlearner Online News 0 02-06-2015 03:07 PM
Researchers Identify New Protein Markers That May Improve Understanding Of ... - RedOrbit
Researchers Identify New Protein Markers That May Improve Understanding Of ... - RedOrbit http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcQPwrmMHLzXwEU-Be9_ulUI3A8SyUt13LcnPE209AB9UxR5swfTmJi980T4cfYqPHvcnpkw-NA Irish Examiner <img alt="" height="1" width="1" /> Researchers Identify New Protein Markers That May Improve Understanding Of ... RedOrbit Testing for GlycA and GlycB by NMR spectroscopy uses signals that arise from the binding of glucose molecules to a variety of circulating inflammatory proteins, especially fibrinogen, Ī±1-antichymotrypsin, haptoglobin-1,...
nmrlearner Online News 0 04-30-2014 02:21 PM
UCSB Research Group Develops A New Tool For Studying Membrane Protein ... - RedOrbit
<img alt="" height="1" width="1" /> UCSB Research Group Develops A New Tool For Studying Membrane Protein ... RedOrbit The team used Overhauser dynamic nuclear polarization enhanced nuclear magnetic resonance (NMR), a technique they developed over the last few years. Using a small and stable radical with an even higher magnetic property than the hydrogen atom of ... and more &raquo; UCSB Research Group Develops A New Tool For Studying Membrane Protein ... - RedOrbit More...
nmrlearner Online News 0 10-03-2013 02:41 AM
Scripps Research Institute Study Finds New Moves In Protein's Evolution - RedOrbit
<img alt="" height="1" width="1" /> Scripps Research Institute Study Finds New Moves In Protein's Evolution RedOrbit The team used a variety of techniques to characterize the two versions of the enzyme, including X-ray crystallography and nuclear magnetic resonance, analyses of DHFR amino-acid sequences and evaluations of the enzyme's functionality in cells and in ... Scripps Research Institute Study Finds New Moves In Protein's Evolution - RedOrbit More...
nmrlearner Online News 0 10-01-2013 09:43 AM
Solution NMR and X-ray crystal structures of membrane-associated Lipoprotein-17 domain reveal a novel fold.
Solution NMR and X-ray crystal structures of membrane-associated Lipoprotein-17 domain reveal a novel fold. Solution NMR and X-ray crystal structures of membrane-associated Lipoprotein-17 domain reveal a novel fold. J Struct Funct Genomics. 2010 Dec 14; Authors: Mani R, Vorobiev S, Swapna GV, Neely H, Janjua H, Ciccosanti C, Xiao R, Acton TB, Everett JK, Hunt J, Montelione GT The conserved Lipoprotein-17 domain of membrane-associated protein Q9PRA0_UREPA from Ureaplasma parvum was selected for structure determination by the Northeast Structural...
nmrlearner Journal club 0 12-15-2010 12:03 PM
[NMR paper] 13C NMR relaxation studies of RNA base and ribose nuclei reveal a complex pattern of
13C NMR relaxation studies of RNA base and ribose nuclei reveal a complex pattern of motions in the RNA binding site for human U1A protein. Related Articles 13C NMR relaxation studies of RNA base and ribose nuclei reveal a complex pattern of motions in the RNA binding site for human U1A protein. J Mol Biol. 2005 Jun 17;349(4):699-715 Authors: Shajani Z, Varani G The widespread importance of induced fit and order-disorder transition in RNA recognition by proteins and small molecules makes it imperative that RNA motional properties are...
nmrlearner Journal club 0 11-25-2010 08:21 PM
[NMR paper] NMR structures reveal how oxidation inactivates thrombomodulin.
NMR structures reveal how oxidation inactivates thrombomodulin. Related Articles NMR structures reveal how oxidation inactivates thrombomodulin. Biochemistry. 2003 Oct 21;42(41):11932-42 Authors: Wood MJ, Becvar LA, Prieto JH, Melacini G, Komives EA Oxidation of Met 388, one of the three linker residues connecting the fourth and fifth EGF-like domains of thrombomodulin (TM), is deleterious for TM activity. An NMR structure of the smallest active fragment of TM (TMEGF45) and a crystal structure of a larger fragment (TMEGF456) bound to thrombin...
nmrlearner Journal club 0 11-24-2010 09:16 PM
[NMR paper] NMR structures of two variants of bovine pancreatic trypsin inhibitor (BPTI) reveal u
NMR structures of two variants of bovine pancreatic trypsin inhibitor (BPTI) reveal unexpected influence of mutations on protein structure and stability. Related Articles NMR structures of two variants of bovine pancreatic trypsin inhibitor (BPTI) reveal unexpected influence of mutations on protein structure and stability. J Mol Biol. 2002 Aug 23;321(4):647-58 Authors: Cierpicki T, Otlewski J Here we determined NMR solution structures of two mutants of bovine pancreatic trypsin inhibitor (BPTI) to reveal structural reasons of their decreased...
nmrlearner Journal club 0 11-24-2010 08:58 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2018, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:30 PM.


Map