Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins - pnas.org

		BioNMR > NMR community > Online News
Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins - pnas.org

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-02-2022, 01:13 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,174

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins - pnas.org

Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins - pnas.org

Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins pnas.org Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins - pnas.org Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins - pnas.org Bacteriophage protein Gp46 is a cross-species inhibitor of nucleoid-associated HU proteins pnas.org Read here	nmrlearner	Online News	0	02-23-2022 11:58 PM
Class-specific interactions between Sis1 J-domain protein and Hsp70 chaperone potentiate disaggregation of misfolded proteins - pnas.org Class-specific interactions between Sis1 J-domain protein and Hsp70 chaperone potentiate disaggregation of misfolded proteins - pnas.org Class-specific interactions between Sis1 J-domain protein and Hsp70 chaperone potentiate disaggregation of misfolded proteins pnas.org Read here	nmrlearner	Online News	0	12-06-2021 11:12 PM
The low-complexity domain of the FUS RNA binding protein self-assembles via the mutually exclusive use of two distinct cross-? cores - pnas.org The low-complexity domain of the FUS RNA binding protein self-assembles via the mutually exclusive use of two distinct cross-? cores - pnas.org The low-complexity domain of the FUS RNA binding protein self-assembles via the mutually exclusive use of two distinct cross-? cores pnas.org Read here	nmrlearner	Online News	0	10-16-2021 08:47 AM
Targeted in situ cross-linking mass spectrometry and integrative modeling reveal the architectures of three proteins from SARS-CoV-2 - pnas.org Targeted in situ cross-linking mass spectrometry and integrative modeling reveal the architectures of three proteins from SARS-CoV-2 - pnas.org Targeted in situ cross-linking mass spectrometry and integrative modeling reveal the architectures of three proteins from SARS-CoV-2 pnas.org Read here	nmrlearner	Online News	0	08-09-2021 09:44 PM
A cocrystal structure of dengue capsid protein in complex of inhibitor - pnas.org A cocrystal structure of dengue capsid protein in complex of inhibitor - pnas.org A cocrystal structure of dengue capsid protein in complex of inhibitor pnas.org Read here	nmrlearner	Online News	0	01-31-2021 02:47 PM
A cocrystal structure of dengue capsid protein in complex of inhibitor - pnas.org A cocrystal structure of dengue capsid protein in complex of inhibitor - pnas.org A cocrystal structure of dengue capsid protein in complex of inhibitor pnas.org Read here	nmrlearner	Online News	0	07-16-2020 09:01 PM
Cross-Species Analysis of Protein Dynamics Associatedwith Hydride and Proton Transfer in the Catalytic Cycle of the Light-DrivenEnzyme Protochlorophyllide Oxidoreductase Cross-Species Analysis of Protein Dynamics Associatedwith Hydride and Proton Transfer in the Catalytic Cycle of the Light-DrivenEnzyme Protochlorophyllide Oxidoreductase http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.5b01355/20160203/images/medium/bi-2015-01355h_0006.gif Biochemistry DOI: 10.1021/acs.biochem.5b01355 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/ajQwVlw7604 More...	nmrlearner	Journal club	0	02-04-2016 11:46 AM
[NMR paper] Protein oligomers studied by solid-state NMR: the case of full-length nucleoid associated protein H-NS. Protein oligomers studied by solid-state NMR: the case of full-length nucleoid associated protein H-NS. Related Articles Protein oligomers studied by solid-state NMR: the case of full-length nucleoid associated protein H-NS. FEBS J. 2013 Apr 20; Authors: Renault M, García J, Cordeiro TN, Baldus M, Pons M Abstract Members of the histone-like nucleoid structuring protein (H-NS) family play roles both as architectural proteins and as modulators of gene expression in Gram-negative bacteria. The H-NS protein participates in modulatory processes...	nmrlearner	Journal club	0	04-23-2013 08:37 PM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off