Aminoglycoside antibiotic kanamycin functionalized tetraphenylethylene molecular probe for highly selective detection of bovine serum albumin protein

		BioNMR > NMR community > Online News
Aminoglycoside antibiotic kanamycin functionalized tetraphenylethylene molecular probe for highly selective detection of bovine serum albumin protein \| Scientific Reports - Nature.com

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

07-08-2022, 03:30 AM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,178

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

Aminoglycoside antibiotic kanamycin functionalized tetraphenylethylene molecular probe for highly selective detection of bovine serum albumin protein | Scientific Reports - Nature.com

Aminoglycoside antibiotic kanamycin functionalized tetraphenylethylene molecular probe for highly selective detection of bovine serum albumin protein | Scientific Reports - Nature.com

Aminoglycoside antibiotic kanamycin functionalized tetraphenylethylene molecular probe for highly selective detection of bovine serum albumin protein | Scientific Reports Nature.com Read here

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Random sampling of the Protein Data Bank: RaSPDB \| Scientific Reports - Nature.com Random sampling of the Protein Data Bank: RaSPDB \| Scientific Reports - Nature.com Random sampling of the Protein Data Bank: RaSPDB \| Scientific Reports Nature.com Read here	nmrlearner	Online News	0	12-18-2021 07:26 AM
DNP-enhanced MAS NMR of bovine serum albumin sediments and solutions From The DNP-NMR Blog: DNP-enhanced MAS NMR of bovine serum albumin sediments and solutions Ravera, E., et al., DNP-enhanced MAS NMR of bovine serum albumin sediments and solutions. J Phys Chem B, 2014. 118(11): p. 2957-65. http://www.ncbi.nlm.nih.gov/pubmed/24460530	nmrlearner	News from NMR blogs	0	06-10-2014 03:16 AM
DNP-Enhanced MAS NMR of Bovine Serum Albumin Sediments and Solutions From The DNP-NMR Blog: DNP-Enhanced MAS NMR of Bovine Serum Albumin Sediments and Solutions Ravera, E., et al., DNP-Enhanced MAS NMR of Bovine Serum Albumin Sediments and Solutions. J Phys Chem B, 2014. http://www.ncbi.nlm.nih.gov/pubmed/24460530	nmrlearner	News from NMR blogs	0	03-05-2014 11:57 PM
[NMR paper] DNP-enhanced MAS NMR of Bovine Serum Albumin Sediments and Solutions. DNP-enhanced MAS NMR of Bovine Serum Albumin Sediments and Solutions. DNP-enhanced MAS NMR of Bovine Serum Albumin Sediments and Solutions. J Phys Chem B. 2014 Jan 24; Authors: Ravera E, Corzilius B, Michaelis VK, Luchinat C, Griffin RG, Bertini I Abstract Protein sedimentation sans cryoprotection is a new approach to magic angle spinning (MAS) and dynamic nuclear polarization (DNP) nuclear magnetic resonance (NMR) spectroscopy of proteins. It increases the sensitivity of the experiments by a factor of ~4.5 in comparison to the...	nmrlearner	Journal club	0	01-28-2014 11:53 AM
[NMR paper] Molecular recognition of aminoglycoside antibiotics by bacterial defence proteins: NMR study of the structural and conformational features of streptomycin inactivation by Bacillus subtilis aminoglycoside-6-adenyl transferase. Molecular recognition of aminoglycoside antibiotics by bacterial defence proteins: NMR study of the structural and conformational features of streptomycin inactivation by Bacillus subtilis aminoglycoside-6-adenyl transferase. Related Articles Molecular recognition of aminoglycoside antibiotics by bacterial defence proteins: NMR study of the structural and conformational features of streptomycin inactivation by Bacillus subtilis aminoglycoside-6-adenyl transferase. Chemistry. 2005 Aug 19;11(17):5102-13 Authors: Corzana F, Cuesta I, Bastida A, Hidalgo A,...	nmrlearner	Journal club	0	12-01-2010 06:56 PM
[NMR paper] Determination of molecular mobility of lyophilized bovine serum albumin and gamma-glo Determination of molecular mobility of lyophilized bovine serum albumin and gamma-globulin by solid-state 1H NMR and relation to aggregation-susceptibility. Related Articles Determination of molecular mobility of lyophilized bovine serum albumin and gamma-globulin by solid-state 1H NMR and relation to aggregation-susceptibility. Pharm Res. 1996 Jun;13(6):926-30 Authors: Yoshioka S, Aso Y, Kojima S PURPOSE: Feasibility of solid-state 1H NMR for determining the mobility of protein molecules in lyophilized cakes was considered. The mobility in...	nmrlearner	Journal club	0	08-22-2010 02:27 PM
[NMR paper] Direct binding of ethanol to bovine serum albumin: a fluorescent and 13C NMR multiple Direct binding of ethanol to bovine serum albumin: a fluorescent and 13C NMR multiplet relaxation study. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-acspubs.jpg Related Articles Direct binding of ethanol to bovine serum albumin: a fluorescent and 13C NMR multiplet relaxation study. Biochemistry. 1996 Jan 9;35(1):340-7 Authors: Avdulov NA, Chochina SV, Daragan VA, Schroeder F, Mayo KH, Wood WG Molecular mechanisms of ethanol interaction with proteins are not well-understood. In the present study, direct...	nmrlearner	Journal club	0	08-22-2010 02:27 PM
[NMR paper] The influence of hydration on the conformation of bovine serum albumin studied by sol The influence of hydration on the conformation of bovine serum albumin studied by solid-state 13C-NMR spectroscopy. Related Articles The influence of hydration on the conformation of bovine serum albumin studied by solid-state 13C-NMR spectroscopy. Biopolymers. 1993 Dec;33(12):1871-6 Authors: Gregory RB, Gangoda M, Gilpin RK, Su W 13C proton-decoupled cross-polarization magic-angle spinning nmr spectra of bovine serum albumin are reported as a function of hydration. Increases in hydration level enhance the resolution of the peak centered at...	nmrlearner	Journal club	0	08-22-2010 03:01 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off