BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from other NMR forums
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 10-19-2011, 09:38 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 17,492
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Transfering programs from varian INOVA to VNMRS

Transfering programs from varian INOVA to VNMRS

I have pulse programs which work great on our varian INOVA instruments, but when I transfer them to varian VNMRS I get error messages and/or decreased signal. Have any of you encountered this problem? I would really appreciate any ideas of what needs to be changed in the pulse program to make it VNMRS compatible. Thank you in advance!



Check if somebody has answered this question on NMRWiki QA forum
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
A source of RPMs for several NMR-related programs
BioLinux-BR Project offers RPM packages for such popular programs as MolMol, PROCHECK and XPLOR-NIH. Project description from its website: BioLinux-BR is a project directed to the scientific community. Our intention is to create a Linux distribution for people with little familiarity with the installation of the operational system and mainly for people that do not know how they must proceed to unpack a program, compile and install it correctly. For these reasons, we are giving our contribution, developing a Linux system that aims to be easy to use and still offering packages that...
nmrlearner General 3 12-18-2014 09:29 AM
[Question from NMRWiki Q&A forum] What does ph2:r statement do in Bruker pulse programs
What does ph2:r statement do in Bruker pulse programs Found a following statement in the pulse program called selnogp p12:sp2:f1 ph2:r What does this do - specifically last bit of the second part - ph2:r the :r? The first one - I understand shaped pulse at power sp2, shape spnam2 and length p12. Looks like ph2 is the phase for the shaped pulse - is that right?
nmrlearner News from other NMR forums 0 08-22-2010 02:30 AM
Programs for simulation of lineshape change due to chemical exchange
http://www.shokhirev.com/nikolai/abc/nmrtut/ik1.gif 1) A simple web server for prediction of effect of chemical exchange on NMR lineshapes can be found here. 2) TwoLineNMR and TwoSiteExchange 3) MEXICO from Alex Bain group.
nmrlearner NMR software 1 06-04-2009 05:54 PM
Pulse programs
http://www.nsm.buffalo.edu/Research/GFT/main.html
sivanmr NMR pulse sequences 0 02-07-2006 12:29 PM
Bryan Sykes's lab NMR programs: csi, gsc, orb, pjnmr, smartnotebook, etc.
Below is a copy of Software Development web.page of Bryan Sykes's lab <center> <table align=center border=0 cellpadding=0 cellspacing=15> <td> http://www.bionmr.ualberta.ca/bds/Common/MacNMR.gif </td> <td> <font size=+2> Software Development </font> Brian Sykes Lab
nmrlearner General 0 10-03-2005 11:09 PM
Programs for alignment of protein NMR ensembles
If you need to align models in your NMR ensemble, you can use the following programs to do so. MolMol - Official website - Linux binaries from Patrick Finerty website - BioXRay distribution SuperPose server Suppose
nmrlearner Structural analysis 0 09-14-2005 07:04 PM
Bruker GFT-NMR pulse programs from Dr. Gao website
Download and description of pulse sequences for GFT spectroscopy are available on Dr. Xiaolian Gao website. http://129.7.228.188/graphics/research_btm.gif
nmrlearner NMR pulse sequences 0 07-30-2005 02:25 AM
Pulse programs
Pulse programs Bruker pulse programs Ad Bax's pulse sequence library Ad Bax's note: This library contains recently published pulse sequences that have been tested on our equipment. By downloading, viewing or using any of them you acknowledge our rules as outlined in disclaimer and copyright. Bruker pulse sequences from Gordon Rule Gordon Rule note: ALL of these employ gradients for artifact suppression. None are sensitivity enhanced. In all HN experiments the water is suppressed by a watergate-type sequence. In some cases crusher gradients are also used. These sequences have been...
ale51 BioNMR Wiki 0 01-29-2005 01:23 AM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2017, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:55 PM.


Map