BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from other NMR forums
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 07-20-2012, 11:13 PM
NMRpipe Yahoo group news's Avatar
Senior Member
 
Join Date: Aug 2010
Posts: 443
NMR Credits: 0
NMR Points: 0
Downloads: 0
Uploads: 0
Default Simple autoFit/nlinLS question

Simple autoFit/nlinLS question

Does nlinLS use the MEMCNT number in any meaningful way? For instance, if you update the clusterIDs (add or remove peaks) but don't change the number of peaks

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMRpipe Yahoo group] Re: Simple autoFit/nlinLS question
Re: Simple autoFit/nlinLS question nlinLS does not use MEMCNT .. it attempts to fit all peaks with the same CLUSTID simultaneously, regardless of MEMCNT values. More...
NMRpipe Yahoo group news News from other NMR forums 0 07-20-2012 11:13 PM
[NMRpipe Yahoo group] Re: autoFit and modelExp
Re: autoFit and modelExp This 2D series fitting via "autoFit.tcl -series ..." models the a given peak in the series on all planes simultaneously, along with any peaks it overlaps. The More...
NMRpipe Yahoo group news News from other NMR forums 0 07-14-2012 01:53 PM
[NMRpipe Yahoo group] autoFit and modelExp
autoFit and modelExp Hello nmrpipers, It is probably a very basic question, but it would be great if you please comment. I have to fit a relaxation decay from a series of 2D More...
NMRpipe Yahoo group news News from other NMR forums 0 07-12-2012 07:17 AM
[Question from NMRWiki Q&A forum] Simple 1H-NMR Assignment Query
Simple 1H-NMR Assignment Query Hi guys, sorry to be really cheeky and sign up simply to ask for help, but here goes. I've done a simple Grignard addition of isopropyl magnesium bromide to 3-methoxy benzaldehyde and I'm just assigning the peaks, but I've come up stumped on one issue. Concerning the isopropyl -CH(CH3)2 proton (at approximately d=1.95p.p.m.), it's observed as a septet, but the integration is 2.14 and I'm stuck as to why. This Grignard addition should occur non-preferentially at either the Re-/Si- face of the aldehyde, so can it be explained by some form of entiomeric...
nmrlearner News from other NMR forums 0 10-15-2011 08:16 PM
[NMRpipe Yahoo group] Re: Peak intensities from nlinLS
Re: Peak intensities from nlinLS Greetings Joshua and all Dear Pipers, In the peak series model, the values which are adjusted by the fit are HEIGHT XW YW X_AXIS Y_AXIS and Z_A1 etc. Z_A0 is More...
NMRpipe Yahoo group news News from other NMR forums 0 09-20-2010 06:11 AM
[NMRpipe Yahoo group] Peak intensities from nlinLS
Peak intensities from nlinLS Greetings all, Long-time reader, first-time poster. I am attempting to use nlinLS to curve-fit and extract peak intensities across a series of HSQC spectra. My More...
NMRpipe Yahoo group news News from other NMR forums 0 09-13-2010 03:27 AM
[Stan NMR blog] RSS (Really Simple Syndication) for Dummies
RSS (Really Simple Syndication) for Dummies Educational article which explains how easy it is to make your site an RSS news channel. More...
nmrlearner News from NMR blogs 0 08-21-2010 06:14 PM
[Stan NMR blog] A simple economy model for MR services
A simple economy model for MR services How many scans are economically appropriate for a magnetic resonance essay? More...
nmrlearner News from NMR blogs 0 08-21-2010 05:42 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 04:04 PM.


Map