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NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


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Unread 12-19-2013, 05:34 AM
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Default 1-2 yrs funding to complete Ph.D. in Chemistry (Ionophores NMR Molecular Modelling)

1-2 yrs funding to complete Ph.D. in Chemistry (Ionophores NMR Molecular Modelling)

Looking for 1-2 yrs funding to complete my Ph.D. in Chemistry. Thesis: 'A Study of Conformational Analysis and Molecular Dynamics by NMR' (University of St. Andrews 1999-2003 Dr. F.G. Riddell)

i. F.G. Riddell, Review: Structure, Conformation, and Mechanism in the Membrane Transport of Alkali Metal Ions by Ionophoric Antibiotics; Chirality, 2002, 14 (2-3), 121 (Cited: 44) ii. T. Matinek, F.G. Riddell, C. F. Wilson, The Conformations of Narasin Alkali Metal Complexes in Solution Determined by NMR Spectroscopy, Journal of the Chemical Society, Perkin Transactions II, 2000, 2192 (Cited: 3) iii. T. Martinek, F.G. Riddell, C. Wilson, C.T. Weller, The Conformations of Monensin-A Alkali Metal Complexes in Solution Determined by NMR Spectroscopy, Journal of the Chemical Society, Perkin Transactions II, 2000, 35 (Cited: 36)

Please contact: Craig F. Wilson

CF/W Craig F. Wilson, B.Sc. (Hons.), M.Sc., MRSC 116 Kings Avenue Singapore 758821 HP: +65 9352 0837 E-mail: craigofw@gmail.com Skype: craigofw Web: www.foodrink.asia MeetUp: www.meetup.com/House-of-Science/ Facebook: http://www.facebook.com/Schroedinger...eCafeSingapore Twitter: twitter.com/#!/craigofw LinkedIn: cz.linkedin.com/pub/craig-wilson/31/2b6/aa8 Academia.Edu: st-andrews.academia.edu/CraigWilson Entrepreneur: wwwinfo.mfcr.cz/cgi-bin/ares/darv_rzp.cgi?ico=74109944&jazyk=cz&xml=1&rozsah=0



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