BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 11-23-2017, 08:38 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 18,077
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Quantifying reaction kinetics of the non-enzymatic decarboxylation of pyruvate and production of peroxymonocarbonate with hyperpolarized 13C-NMR

From The DNP-NMR Blog:

Quantifying reaction kinetics of the non-enzymatic decarboxylation of pyruvate and production of peroxymonocarbonate with hyperpolarized 13C-NMR

p.p1 {margin: 0.0px 0.0px 0.0px 36.0px; text-indent: -36.0px; font: 12.0px Helvetica}
Drachman, N., et al., Quantifying reaction kinetics of the non-enzymatic decarboxylation of pyruvate and production of peroxymonocarbonate with hyperpolarized 13C-NMR. Phys. Chem. Chem. Phys., 2017. 19(29): p. 19316-19325.


http://dx.doi.org/10.1039/C7CP02041D


<div style="text-align: justify;">The transient nature of intermediate states in chemical reactions has made their detailed investigation difficult. In this study, we demonstrate the utility of hyperpolarized 13C-NMR to directly observe and quantify the kinetics of the intermediate compound in the non-enzymatic decarboxylation of pyruvate via H2O2 with time resolutions of
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Pyruvate cellular uptake and enzymatic conversion probed by dissolution DNP-NMR: the impact of overexpressed membrane transporters
From The DNP-NMR Blog: Pyruvate cellular uptake and enzymatic conversion probed by dissolution DNP-NMR: the impact of overexpressed membrane transporters p.p1 {margin: 0.0px 0.0px 0.0px 36.0px; text-indent: -36.0px; font: 12.0px Helvetica} Balzan, R., et al., Pyruvate cellular uptake and enzymatic conversion probed by dissolution DNP-NMR: the impact of overexpressed membrane transporters. Magn Reson Chem, 2017. 55(6): p. 579-583. https://www.ncbi.nlm.nih.gov/pubmed/27859555
nmrlearner News from NMR blogs 0 09-29-2017 10:01 PM
Quantification of rate constants for successive enzymatic reactions with DNP hyperpolarized MR
From The DNP-NMR Blog: Quantification of rate constants for successive enzymatic reactions with DNP hyperpolarized MR p.p1 {margin: 0.0px 0.0px 0.0px 36.0px; text-indent: -36.0px; font: 12.0px Helvetica} Allouche-Arnon, H., et al., Quantification of rate constants for successive enzymatic reactions with DNP hyperpolarized MR. NMR Biomed, 2014. 27(6): p. 656-62. https://www.ncbi.nlm.nih.gov/pubmed/24639024
nmrlearner News from NMR blogs 0 01-20-2017 04:49 PM
Predicting and Understanding the Enzymatic Inhibitionof Human Peroxiredoxin 5 by 4-Substituted Pyrocatechols byCombining Funnel Metadynamics, Solution NMR, and Steady-State Kinetics
Predicting and Understanding the Enzymatic Inhibitionof Human Peroxiredoxin 5 by 4-Substituted Pyrocatechols byCombining Funnel Metadynamics, Solution NMR, and Steady-State Kinetics http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.6b00367/20160610/images/medium/bi-2016-003677_0006.gif Biochemistry DOI: 10.1021/acs.biochem.6b00367 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/7kDJzLWTf4w More...
nmrlearner Journal club 0 06-11-2016 01:09 PM
[NMR paper] Predicting and Understanding the Enzymatic Inhibition of Human Peroxiredoxin 5 by 4-Substituted Pyrocatechols Combining Funnel-Metadynamics, Solution NMR and Steady-State Kinetics.
Predicting and Understanding the Enzymatic Inhibition of Human Peroxiredoxin 5 by 4-Substituted Pyrocatechols Combining Funnel-Metadynamics, Solution NMR and Steady-State Kinetics. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--pubs.acs.org-images-pubmed-acspubs.jpg Related Articles Predicting and Understanding the Enzymatic Inhibition of Human Peroxiredoxin 5 by 4-Substituted Pyrocatechols Combining Funnel-Metadynamics, Solution NMR and Steady-State Kinetics. Biochemistry. 2016 May 30; Authors: Chow ML, Troussicot L,...
nmrlearner Journal club 0 05-31-2016 09:07 PM
Metabolic imaging of patients with prostate cancer using hyperpolarized [1-(1)(3)C]pyruvate
From The DNP-NMR Blog: Metabolic imaging of patients with prostate cancer using hyperpolarized pyruvate Nelson, S.J., et al., Metabolic imaging of patients with prostate cancer using hyperpolarized pyruvate. Sci Transl Med, 2013. 5(198): p. 198ra108. http://www.ncbi.nlm.nih.gov/pubmed/23946197
nmrlearner News from NMR blogs 0 12-29-2015 02:29 AM
Radial spectroscopic MRI of hyperpolarized [1-(13) C] pyruvate at 7 tesla
From The DNP-NMR Blog: Radial spectroscopic MRI of hyperpolarized pyruvate at 7 tesla Ramirez, M.S., et al., Radial spectroscopic MRI of hyperpolarized pyruvate at 7 tesla. Magn Reson Med, 2014. 72(4): p. 986-95. http://www.ncbi.nlm.nih.gov/pubmed/24186845
nmrlearner News from NMR blogs 0 03-02-2015 04:03 PM
Hyperpolarized [1,(13)C]pyruvate in lysed human erythrocytes: effects of co-substrate supply on reaction time courses
From The DNP-NMR Blog: Hyperpolarized pyruvate in lysed human erythrocytes: effects of co-substrate supply on reaction time courses Pages, G., Y.L. Tan, and P.W. Kuchel, Hyperpolarized pyruvate in lysed human erythrocytes: effects of co-substrate supply on reaction time courses. NMR Biomed, 2014. 27(10): p. 1203-10. http://www.ncbi.nlm.nih.gov/pubmed/25111006
nmrlearner News from NMR blogs 0 02-25-2015 05:56 PM
Apparent rate constant mapping using hyperpolarized [113C]pyruvate
From The DNP-NMR Blog: Apparent rate constant mapping using hyperpolarized pyruvate Khegai, O., et al., Apparent rate constant mapping using hyperpolarized pyruvate. NMR in Biomedicine, 2014. 27(10): p. 1256-1265. http://dx.doi.org/10.1002/nbm.3174
nmrlearner News from NMR blogs 0 01-26-2015 03:48 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2017, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:58 PM.


Map