BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 06-22-2020, 10:19 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,173
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Versatile Dynamic Nuclear Polarization Hardware with Integrated Electron Paramagnetic Resonance Capabilities #DNPNMR

From The DNP-NMR Blog:

Versatile Dynamic Nuclear Polarization Hardware with Integrated Electron Paramagnetic Resonance Capabilities #DNPNMR

Leavesley, Alisa, Ilia Kaminker, and Songi Han. “Versatile Dynamic Nuclear Polarization Hardware with Integrated Electron Paramagnetic Resonance Capabilities,” 7:22, 2018.


https://doi.org/10.1002/9780470034590.emrstm1564.


Successful application of dynamic nuclear polarization (DNP) often relies on procedures and sample formulations that are empirically optimized. In order to expand the scope of DNP to a wider range of sample systems and applications, a better understanding of the underlying DNP mechanism and spin dynamics is required. An aspect of DNP spin dynamics that is understudied is the electron spins, which can be attributed to high-field EPR capabilities not being commonly available under DNP conditions. Here, we present a combined and versatile DNP/EPR instrument that allows us to simultaneously follow the electron and nuclear spin dynamics during the course of the DNP experiment. A modular design ensures the versatility of such an instrument, where a solid-state microwave (?w) source permits high agility for electron spin manipulation. This article presents a detailed description of the DNP/EPR instrument, including the discussion of the components required for a dual DNP/EPR instrument, the integration of arbitrary waveform generation for shape ?w pulses, and a two-source quasi-optical configuration that enables artifact-free electron–electron double resonance experiments at 200 GHz. We conclude by providing select examples in which the evaluation of electron spin dynamics was necessary to elucidate the underlying DNP mechanism.


Go to The DNP-NMR Blog for more info.
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Dynamic Nuclear Polarization with Electron Decoupling in Intact Human Cells and Cell Lysates #DNPNMR
From The DNP-NMR Blog: Dynamic Nuclear Polarization with Electron Decoupling in Intact Human Cells and Cell Lysates #DNPNMR Judge, Patrick T., Erika L. Sesti, Lauren E. Price, Brice J. Albert, Nicholas Alaniva, Edward P. Saliba, Thomas Halbritter, Snorri Th. Sigurdsson, George B. Kyei, and Alexander B. Barnes. “Dynamic Nuclear Polarization with Electron Decoupling in Intact Human Cells and Cell Lysates.” The Journal of Physical Chemistry B, February 21, 2020. https://doi.org/10.1021/acs.jpcb.9b10494.
nmrlearner News from NMR blogs 0 06-13-2020 05:51 PM
Electron decoupling with cross polarization and dynamic nuclear polarization below 6 K #DNPNMR
From The DNP-NMR Blog: Electron decoupling with cross polarization and dynamic nuclear polarization below 6 K #DNPNMR Sesti, Erika L., Edward P. Saliba, Nicholas Alaniva, and Alexander B. Barnes. “Electron Decoupling with Cross Polarization and Dynamic Nuclear Polarization below 6 K.” Journal of Magnetic Resonance 295 (October 2018): 1–5. https://doi.org/10.1016/j.jmr.2018.07.016.
nmrlearner News from NMR blogs 0 03-24-2019 10:41 PM
Frequency-agile gyrotron for electron decoupling and pulsed dynamic nuclear polarization #DNPNMR
From The DNP-NMR Blog: Frequency-agile gyrotron for electron decoupling and pulsed dynamic nuclear polarization #DNPNMR Scott, F.J., et al., Frequency-agile gyrotron for electron decoupling and pulsed dynamic nuclear polarization. J Magn Reson, 2018. 289: p. 45-54. https://www.ncbi.nlm.nih.gov/pubmed/29471275
nmrlearner News from NMR blogs 0 04-27-2018 10:26 PM
Electron Decoupling with Dynamic Nuclear Polarization in Rotating Solids #DNPNMR
From The DNP-NMR Blog: Electron Decoupling with Dynamic Nuclear Polarization in Rotating Solids #DNPNMR p.p1 {margin: 0.0px 0.0px 0.0px 36.0px; text-indent: -36.0px; font: 12.0px Helvetica} Saliba, E.P., et al., Electron Decoupling with Dynamic Nuclear Polarization in Rotating Solids. J Am Chem Soc, 2017. 139(18): p. 6310-6313. https://www.ncbi.nlm.nih.gov/pubmed/28429936
nmrlearner News from NMR blogs 0 08-11-2017 08:52 PM
Effect of electron spectral diffusion on static dynamic nuclear polarization at 7 Tesla #DNPNMR
From The DNP-NMR Blog: Effect of electron spectral diffusion on static dynamic nuclear polarization at 7 Tesla #DNPNMR p.p1 {margin: 0.0px 0.0px 0.0px 36.0px; text-indent: -36.0px; font: 12.0px Helvetica} Leavesley, A., et al., Effect of electron spectral diffusion on static dynamic nuclear polarization at 7 Tesla. Phys. Chem. Chem. Phys., 2017. 19(5): p. 3596-3605. https://www.ncbi.nlm.nih.gov/pubmed/28094364
nmrlearner News from NMR blogs 0 06-02-2017 08:33 PM
A peripheral component interconnect express-based scalable and highly integrated pulsed spectrometer for solution state dynamic nuclear polarization #DNPNMR
From The DNP-NMR Blog: A peripheral component interconnect express-based scalable and highly integrated pulsed spectrometer for solution state dynamic nuclear polarization #DNPNMR He, Y., et al., A peripheral component interconnect express-based scalable and highly integrated pulsed spectrometer for solution state dynamic nuclear polarization. Rev Sci Instrum, 2015. 86(8): p. 083101. http://www.ncbi.nlm.nih.gov/pubmed/26329168
nmrlearner News from NMR blogs 0 06-18-2016 01:11 AM
A versatile and modular quasi optics-based 200GHz dual dynamic nuclear polarization and electron paramagnetic resonance instrument
From The DNP-NMR Blog: A versatile and modular quasi optics-based 200GHz dual dynamic nuclear polarization and electron paramagnetic resonance instrument I know it's still early in the year, but this may be already my most favorite article for 2016.
nmrlearner News from NMR blogs 0 04-13-2016 10:23 PM
Observation of strongly forbidden solid effect dynamic nuclear polarization transitions via electron-electron double resonance detected NMR
From The DNP-NMR Blog: Observation of strongly forbidden solid effect dynamic nuclear polarization transitions via electron-electron double resonance detected NMR Smith, A.A., et al., Observation of strongly forbidden solid effect dynamic nuclear polarization transitions via electron-electron double resonance detected NMR. J Chem Phys, 2013. 139(21): p. 214201. http://www.ncbi.nlm.nih.gov/pubmed/24320373
nmrlearner News from NMR blogs 0 05-06-2014 01:57 AM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 05:42 PM.


Map