BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > NMR community > News from NMR blogs
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 08-07-2020, 08:10 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,137
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default [NMR] 2nd PhD Position in Dissolution DNP at the University of Vienna #DNPNMR

From The DNP-NMR Blog:

[NMR] 2nd PhD Position in Dissolution DNP at the University of Vienna #DNPNMR

Dear colleagues,


a 2nd 4-year Ph.D. position at the institute of biological chemistry at the University of Vienna is available in the field of dissolution DNP with a special focus on biomineralization.


A project starts the 01.10.20 and a description can be found below. I would like to invite interested students to send an application including a letter of motivation (German or English) directly to:
dennis.kurzbach@univie.ac.at.


With kind regards,
Dennis Kurzbach


Project Description:
The DNP group of the University Vienna (www.Vienna-DNP.at) is looking for a motivated student to carry out a PhD thesis project centered around novel (hyperpolarization) tools based on NMR spectroscopy for the characterization of biomineralization processes.


Our lab is working on combining dissolution dynamic nuclear polarization
(DDNP) [1], a technique to improve signal intensities in NMR spectra, with time-resolved detection of biomolecular NMR spectra on milliseconds to minutes time-scales. Our lab is equipped with 8 state-of-the-art NMR devices and integrated into a fully equipped biochemistry facility.


The project is centered around the understanding of biomineralization processes, i.e. the ability of living organisms to produce solid phases. It aims at the development of time-resolved models that describe the peptides' mineralization events at an atomistic level of resolution to obtain a better understanding of the biological function of the underlying molecular interactions. In other words, an idea shell be developed of how biominerals form with time and of how individual atoms act at different points in time.


The interdisciplinary PhD project combines biochemical and biophysical research of medicinal and societal relevance with cutting-edge instrumentational and methodological developments of the NMR technology.


The successful candidate holds a relevant degree in physics, chemistry, biochemistry or a similar field. She/he will work on the development of NMR techniques in combination with dissolution DNP to characterize the interaction of designer peptides with silicates. These experiments allow determining the state of a protein in less than 1 s, which will eventually allow one to develop a model of the mineral formation to guide future developments in materials design and fundamental biophysics.


The University of Vienna aims at increasing the employment of women in both managing and academic positions and therefore invites applications from qualified female candidates.


The University of Vienna offers
• a dynamic research location with well-established research funding provisions • attractive working conditions in a city with a high quality of life • comprehensive advice and support in relation to finding accommodation, change of schools and dual career • a wide range of support services offered by central service institutions Funding Notes


References


[1] Emmanuelle Weber, Thomas Kress, Daniel Abergel, Steffi Sewsurn, Thierry Azais, Dennis Kurzbach: Assessing the onset of calcium phosphate nucleation by hyperpolarized real-time NMR. Anal. Chem. 2020, 92, 11, 7666–7673.


--
___________________________________
Assoc.-Prof. Dr. Dennis Kurzbach
University of Vienna
Faculty of Chemistry
Institute of Biological Chemistry
Währinger Str. 38
1070 Vienna
Austria
www.Vienna-DNP.at







Go to The DNP-NMR Blog for more info.
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR] PhD Position in Dissolution DNP at the University of Vienna #DNPNMR
From The DNP-NMR Blog: PhD Position in Dissolution DNP at the University of Vienna #DNPNMR Dear colleagues, a 4-year Ph.D. position at the institute of biological chemistry at the University of Vienna is available in the field of dissolution DNP with a special focus on biomineralization.
nmrlearner News from NMR blogs 0 04-23-2020 11:10 PM
[NMR] PhD position at University of Lille - Solid-state NMR of optoelectronic materials #DNPNMR
From The DNP-NMR Blog: PhD position at University of Lille - Solid-state NMR of optoelectronic materials #DNPNMR University of Lille invites applications for a 3-year PhD position in the area of solid-state NMR of optoelectronic materials. The research project, funded by the University of Lille and the region Haute-de-France, will start from 1 October 2019. PhD student will be supervised by Dr. Manjunatha Reddy in close collaboration with Dr. Laurent Delevoye and Prof. Olivier Lafon at the Department of Chemistry, Solid-State Chemistry Division. Send your application as a single...
nmrlearner News from NMR blogs 0 05-06-2019 04:47 PM
[NMR] PhD position on solid-state NMR of materials at the University of Lille, France #DNPNMR
From The DNP-NMR Blog: PhD position on solid-state NMR of materials at the University of Lille, France #DNPNMR Please forward to potential candidates.
nmrlearner News from NMR blogs 0 02-26-2018 04:18 PM
[NMR] PhD position at the CNRS/University of Marseille #DNPNMR
From The DNP-NMR Blog: PhD position at the CNRS/University of Marseille #DNPNMR ERC-funded PhD position is available in Marseille on the structural investigation of functional organic materials by DNP and NMR Project title: “Structural investigation of polymorphic organic powders at natural isotopic abundance”
nmrlearner News from NMR blogs 0 02-16-2018 03:50 PM
[NMR] Postdoc position on SSNMR at the University of Lille, France #DNPNMR
From The DNP-NMR Blog: Postdoc position on SSNMR at the University of Lille, France #DNPNMR Fromt the Ampere Magnetic Resonance List
nmrlearner News from NMR blogs 0 09-25-2017 08:42 PM
[NMR] Postdoc position on SSNMR at the University of Lille, France #DNPNMR
From The DNP-NMR Blog: Postdoc position on SSNMR at the University of Lille, France #DNPNMR Please forward to potential candidates. Project title: Development of high-field (DNP)-NMR methods to detect quadrupolar nuclei on catalytic surfaces
nmrlearner News from NMR blogs 0 07-19-2017 12:46 AM
[NMR] PhD position on SSNMR at the University of Lille, France #DNPNMR
From The DNP-NMR Blog: PhD position on SSNMR at the University of Lille, France #DNPNMR From the Ampere Magnetic Resonance List
nmrlearner News from NMR blogs 0 04-13-2017 01:41 AM
[NMR] Post-doctoral position in MAS-DNP at Aix-Marseille University (France) #DNPNMR
From The DNP-NMR Blog: Post-doctoral position in MAS-DNP at Aix-Marseille University (France) #DNPNMR From the Ampere Magnetic Resonance List A one-year post-doctoral position is available at the solid-state NMR group of Aix-Marseille University. The goal of the project is to investigate molecular crystals and powders, which cannot be characterized with conventional techniques, using solid-state NMR and dynamic nuclear polarization (DNP). The research work will be based on the preliminary results published in Angew. Chem. Int. Ed. Vol.54 p.6028 (dx.doi.org/10.1002/anie.201501172)
nmrlearner News from NMR blogs 0 09-22-2016 10:41 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:02 AM.


Map