BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 08-04-2022, 02:39 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 22,317
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria

A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria


Angewandte Chemie International Edition, EarlyView.

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] Deciphering the Binding Interactions between Acinetobacter baumannii ACP and beta-ketoacyl ACP Synthase III to Improve Antibiotic Targeting Using NMR Spectroscopy
Deciphering the Binding Interactions between Acinetobacter baumannii ACP and beta-ketoacyl ACP Synthase III to Improve Antibiotic Targeting Using NMR Spectroscopy Fatty acid synthesis is essential for bacterial viability. Thus, fatty acid synthases (FASs) represent effective targets for antibiotics. Nevertheless, multidrug-resistant bacteria, including the human opportunistic bacteria, Acinetobacter baumannii, are emerging threats. Meanwhile, the FAS pathway of A. baumannii is relatively unexplored. Considering that acyl carrier protein (ACP) has an important role in the delivery of fatty...
nmrlearner Journal club 0 04-03-2021 10:01 PM
Staying ahead of antibiotic resistance: Protein structure research paves the way for more efficient treatment - Phys.org
Staying ahead of antibiotic resistance: Protein structure research paves the way for more efficient treatment - Phys.org Staying ahead of antibiotic resistance: Protein structure research paves the way for more efficient treatment Phys.org Read here
nmrlearner Online News 0 05-18-2020 09:18 PM
PSC's Bridges Helps Scientists Understand Monkey Protein that Confers Immunity to HIV - HPCwire
PSC's Bridges Helps Scientists Understand Monkey Protein that Confers Immunity to HIV - HPCwire http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcTOn_Se4BjxkKk8_tjkXPeJJ5nGnCtFVtcjqjopEnoZ5Ht4oserC49fGy1Gc-8eH8A52nGooWPY HPCwire <img alt="" height="1" width="1"> PSC's Bridges Helps Scientists Understand Monkey Protein that Confers Immunity to HIV HPCwire Angela Gronenborn of Pitt and Tatyana Polenova of Delaware used a lab technique called nuclear magnetic resonance (NMR) to study which parts of the virus's capsid protein, called CA, are affected when TRIM5α is present. NMR...
nmrlearner Online News 0 11-25-2018 06:02 AM
[NMR paper] Pretreatment of anaerobic digester samples by hydrochloric acid for solution-state 1H and 13C NMR spectroscopic characterization of organic matter.
Pretreatment of anaerobic digester samples by hydrochloric acid for solution-state 1H and 13C NMR spectroscopic characterization of organic matter. Pretreatment of anaerobic digester samples by hydrochloric acid for solution-state 1H and 13C NMR spectroscopic characterization of organic matter. Chemosphere. 2018 Feb 05;199:201-209 Authors: Shakeri Yekta S, Hedenstrm M, Stehr JE, Dario M, Hertkorn N, Bjrn A Abstract Pretreatment of anaerobic digester samples by hydrochloric acid (HCl) resulted in removal of Fe-based...
nmrlearner Journal club 0 02-14-2018 04:47 PM
Alanine 501 Mutations in Penicillin-Binding Protein 2 from Neisseria gonorrhoeae: Structure, Mechanism, and Effectson Cephalosporin Resistance and Biological Fitness
Alanine 501 Mutations in Penicillin-Binding Protein 2 from Neisseria gonorrhoeae: Structure, Mechanism, and Effectson Cephalosporin Resistance and Biological Fitness http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.6b01030/20170216/images/medium/bi-2016-01030j_0008.gif Biochemistry DOI: 10.1021/acs.biochem.6b01030 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/c5Ejo7TQKNU More...
nmrlearner Journal club 0 02-17-2017 07:32 AM
Unravelling the secret of antibiotic resistance - Phys.Org
http://www.bionmr.com//t0.gstatic.com/images?q=tbn:ANd9GcQrSW_2Js0UxyV4CKAVBlZwuQU3gD2nd4WXI7Rz-VO4kgsMKKSJUj3BnyqIwVZVpRpayifLXFM Phys.Org <img alt="" height="1" width="1"> Unravelling the secret of antibiotic resistance Phys.Org A recent £17 million investment in some of the best nuclear magnetic resonance and electron microscopy facilities in the world is now enabling scientists to remain at the forefront of research into complex proteins. The University of Leeds has played a ... and more &raquo; Unravelling the secret of antibiotic resistance - Phys.Org
nmrlearner Online News 0 03-25-2016 04:12 PM
NMR Structure and Calcium-Binding Properties of the Tellurite Resistance Protein TerD from Klebsiella pneumoniae.
NMR Structure and Calcium-Binding Properties of the Tellurite Resistance Protein TerD from Klebsiella pneumoniae. NMR Structure and Calcium-Binding Properties of the Tellurite Resistance Protein TerD from Klebsiella pneumoniae. J Mol Biol. 2010 Nov 25; Authors: Pan YR, Lou YC, Seven AB, Rizo J, Chen C The tellurium oxyanion, TeO(3)(2-), has been used in the treatment of infectious diseases caused by mycobacteria. However, many pathogenic bacteria show tellurite resistance. Several tellurite resistance genes have been identified, and these genes...
nmrlearner Journal club 0 11-30-2010 08:14 PM
[NMR paper] Flavonoid binding to a multi-drug-resistance transporter protein: an STD-NMR study.
Flavonoid binding to a multi-drug-resistance transporter protein: an STD-NMR study. Related Articles Flavonoid binding to a multi-drug-resistance transporter protein: an STD-NMR study. Anal Bioanal Chem. 2004 Aug;379(7-8):1045-9 Authors: Nissler L, Gebhardt R, Berger S Flavonoids are well known to inhibit the function of the multi-drug-resistance (mdr) transporter by interacting with their ATP binding domains. The precise orientation of these molecules inside the ATP binding pocket is still unclear. We applied the saturation transfer...
nmrlearner Journal club 0 11-24-2010 09:51 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2023, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:00 AM.


Map