BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 03-03-2012, 01:39 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 18,793
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Simultaneous acquisition of PAR and PAIN spectra

Simultaneous acquisition of PAR and PAIN spectra


Abstract We present a scheme that allows the simultaneous detection of PAR and PAIN correlation spectra in a single two-dimensional experiment. For both spectra, we obtain almost the same signal-to-noise ratio as if a PAR or PAIN spectrum is recorded separately, which in turn implies that one of the spectra may be considered additional information for free. The experiment is based on the observation that in a PAIN experiment, the PAR condition is always also fulfilled. The performance is demonstrated experimentally using uniformly 13C,15N-labeled samples of N??f??MLF??OH and ubiquitin.

  • Content Type Journal Article
  • Category Communication
  • Pages 1-6
  • DOI 10.1007/s10858-012-9616-7
  • Authors
    • Anders B. Nielsen, Physical Chemistry, ETH Zürich, Wolfgang-Pauli-Strasse 10, 8093 Zürich, Switzerland
    • Kathrin Székely, Physical Chemistry, ETH Zürich, Wolfgang-Pauli-Strasse 10, 8093 Zürich, Switzerland
    • Julia Gath, Physical Chemistry, ETH Zürich, Wolfgang-Pauli-Strasse 10, 8093 Zürich, Switzerland
    • Matthias Ernst, Physical Chemistry, ETH Zürich, Wolfgang-Pauli-Strasse 10, 8093 Zürich, Switzerland
    • Niels Chr. Nielsen, Interdisciplinary Nanoscience Center (iNANO) and Department of Chemistry, Center for Insoluble Protein Structures (inSPIN), University of Aarhus, 8000 Aarhus C, Denmark
    • Beat H. Meier, Physical Chemistry, ETH Zürich, Wolfgang-Pauli-Strasse 10, 8093 Zürich, Switzerland


Source: Journal of Biomolecular NMR
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Simultaneous acquisition of 13Cα??15N and 1H??15N??15N sequential correlations in proteins: application of dual receivers in 3D HNN
Simultaneous acquisition of 13Cα??15N and 1H??15N??15N sequential correlations in proteins: application of dual receivers in 3D HNN Abstract We describe here, adaptation of the HNN pulse sequence for multiple nuclei detection using two independent receivers by utilizing the detectable 13Cα transverse magnetization which was otherwise dephased out in the conventional HNN experiment. It enables acquisition of 2D 13Cα??15N sequential correlations along with the standard 3D 15N??15N??1H correlations, which provides directionality to sequential walk in HNN, on one hand, and enhances...
nmrlearner Journal club 0 12-31-2011 10:40 AM
AssignFit: a program for simultaneous assignment and structure refinement from solid-state NMR spectra
AssignFit: a program for simultaneous assignment and structure refinement from solid-state NMR spectra Publication year: 2011 Source: Journal of Magnetic Resonance, Available online 8 October 2011</br> Ye*Tian, Charles D.*Schwieters, Stanley J.*Opella, Francesca M.*Marassi</br> AssignFit is a computer program developed within the XPLOR-NIH package for the assignment of dipolar coupling (DC) and chemical shift anisotropy (CSA) restraints derived from the solid-state NMR spectra of protein samples with uniaxial order. The method is based on minimizing the difference between...
nmrlearner Journal club 0 10-10-2011 06:27 AM
[Question from NMRWiki Q&A forum] Switiching off the receiver during acquisition
Switiching off the receiver during acquisition Hello nmr wikier. I use Bruker Avance I AQS 400. TopSpin Version 1.3 For a test I want to switch off the receiver during the acquisition. In pursuance of the pulse programming manual I can do that with the statement setrtp. So I wrote following pulse programm (excerpt): 1 ze 2 30m p1 ph1 3 DE1 DE2 DERX DEADC DEPA DE3 4 0.1u DWELL_GEN:f1
nmrlearner News from other NMR forums 0 09-13-2011 09:15 PM
[NMR paper] Simultaneous assignment and structure determination of protein backbones by using NMR
Simultaneous assignment and structure determination of protein backbones by using NMR dipolar couplings. Related Articles Simultaneous assignment and structure determination of protein backbones by using NMR dipolar couplings. Angew Chem Int Ed Engl. 2004 Jun 28;43(26):3479-81 Authors: Jung YS, Sharma M, Zweckstetter M
nmrlearner Journal club 0 11-24-2010 09:51 PM
[NMR paper] Simultaneous assignment and structure determination of a membrane protein from NMR or
Simultaneous assignment and structure determination of a membrane protein from NMR orientational restraints. Simultaneous assignment and structure determination of a membrane protein from NMR orientational restraints. Protein Sci. 2003 Mar;12(3):403-11 Authors: Marassi FM, Opella SJ A solid-state NMR approach for simultaneous resonance assignment and three-dimensional structure determination of a membrane protein in lipid bilayers is described. The approach is based on the scattering, hence the descriptor "shotgun," of (15)N-labeled amino...
nmrlearner Journal club 0 11-24-2010 09:01 PM
[NMR900 blog] Agilent Completes Acquisition of Varian
Agilent Completes Acquisition of Varian Agilent Technologies has finalized its acquisition of Varian. Following the announcement Varian, Inc. (VARI) was delisted from NASDAQ and ceased to exist as an independent company. Varian's MR business will be housed within Agilent's Life Sciences Group (LSG). For more details on this merger see Stan's NMR Blog, who has been following this story since July 2009. http://www.ebyte.it/stan/blog.htmlhttps://blogger.googleusercontent.com/tracker/8663203727601106205-2192010626801109121?l=nmr900.blogspot.com Read complete story on NMR900 blog
nmrlearner News from NMR blogs 0 08-22-2010 02:30 AM
[NMR900 blog] Agilent Completes Acquisition of Varian
Agilent Completes Acquisition of Varian Agilent Technologies has finalized its acquisition of Varian. Following the announcement Varian, Inc. (VARI) was delisted from NASDAQ and ceased to exist as an independent company. Varian's MR business will be housed within Agilent's Life Sciences Group (LSG). For more details on this merger see Stan's NMR Blog, who has been following this story since July 2009. http://www.ebyte.it/stan/blog.htmlhttps://blogger.googleusercontent.com/tracker/8663203727601106205-2192010626801109121?l=nmr900.blogspot.com Read complete story on NMR900 blog
nmrlearner News from NMR blogs 0 08-22-2010 02:18 AM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2018, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:30 PM.


Map