BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 08-21-2010, 11:12 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,134
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Simple techniques for the quantification of protein secondary structure by 1H NMR spe

Simple techniques for the quantification of protein secondary structure by 1H NMR spectroscopy.

Related Articles Simple techniques for the quantification of protein secondary structure by 1H NMR spectroscopy.

FEBS Lett. 1991 Nov 18;293(1-2):72-80

Authors: Wishart DS, Sykes BD, Richards FM

Previous work by Wishart et al. (in press) and others [(1989) J. Magn. Reson. 83, 441-449; (1990) J. Magn. Reson. 90, 165-176] has shown a strong tendency for protein secondary structure to be manifested in 1H NMR chemical shifts. Based on these earlier results, two techniques have been developed for the quantification of secondary structure in proteins. Both methods allow for the rapid and accurate determination of the percent content of helix, coil, and beta-strand based on the integration (or peak enumeration) of selected portions of either 1-D or 2-D 1H NMR spectra. These new and very simple procedures have been found to compare quite favorably to other well established techniques for secondary structure determination such as CD, Raman and IR spectroscopy.

PMID: 1959674 [PubMed - indexed for MEDLINE]



Source: PubMed
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by InnerBody (InnerBody) on 2011-04-11T18:30:37Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by InnerBody (InnerBody) on 2011-04-11T18:30:37Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by 4Hypertension (4Hypertension) on 2011-04-11T18:30:37Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by 4Depression (4Depression) on 2011-04-11T18:30:37Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by 4Arthritis (4Arthritis) on 2011-04-11T18:30:37Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by 4Strokes (4Strokes) on 2011-04-11T18:30:36Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR tweet] Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX
Rapid quantification of inflammation in tissue samples using perfluorocarbon ...: Quantification of inflammation... http://bit.ly/e72PgX Published by 4HeartDisease (4HeartDisease) on 2011-04-11T18:30:36Z Source: Twitter
nmrlearner Twitter NMR 0 04-11-2011 06:34 PM
[NMR paper] Simple techniques for the quantification of protein secondary structure by 1H NMR spe
Simple techniques for the quantification of protein secondary structure by 1H NMR spectroscopy. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles Simple techniques for the quantification of protein secondary structure by 1H NMR spectroscopy. FEBS Lett. 1991 Nov 18;293(1-2):72-80 Authors: Wishart DS, Sykes BD, Richards FM Previous work by Wishart et al. (in press) and others has shown a strong tendency for protein secondary structure to be manifested in 1H NMR chemical...
nmrlearner Journal club 0 08-21-2010 11:12 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 03:17 PM.


Map