BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 05-22-2021, 02:46 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 21,266
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Particle-by-particle in situ characterization of the protein corona via real-time 3D single-particle tracking spectroscopy

Particle-by-particle in situ characterization of the protein corona via real-time 3D single-particle tracking spectroscopy


Angewandte Chemie International Edition, Accepted Article.

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Single-particle Cryo-EM Principles & Uses - News-Medical.net
Single-particle Cryo-EM Principles & Uses News-Medical.netSingle-particle cryo-EM is an analytical technique used to deduce the 3D structure of macromolecules (particularly proteins) as an alternative to X-Ray ... Single-particle Cryo-EM Principles & Uses - News-Medical.net More...
nmrlearner Online News 0 05-02-2019 06:55 PM
Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy [Biophysics and Computational Biology]
Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy Rui Huang, Felipe Perez, Lewis E. Kay... Date: 2017-11-14 The 20S proteasome core particle (20S CP) plays an integral role in cellular homeostasis by degrading proteins no longer required for function. The process is, in part, controlled via gating residues localized to the ends of the heptameric barrel-like CP structure that occlude substrate entry pores, preventing unregulated degradation of... Read More PNAS: Number: 46
nmrlearner Journal club 0 11-15-2017 08:36 AM
[NMR paper] Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy.
Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy. Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy. Proc Natl Acad Sci U S A. 2017 Oct 30;: Authors: Huang R, Pérez F, Kay LE Abstract The 20S proteasome core particle (20S CP) plays an integral role in cellular homeostasis by degrading proteins no longer required for function. The process is, in part, controlled via gating residues localized to the ends of the...
nmrlearner Journal club 0 11-01-2017 07:49 PM
Journal Highlight: Lipoprotein particle concentration measured by nuclear magnetic resonance spectroscopy is associated with gestational age at delivery: a prospective cohort study
Journal Highlight: Lipoprotein particle concentration measured by nuclear magnetic resonance spectroscopy is associated with gestational age at delivery: a prospective cohort study http://www.spectroscopynow.com/common/images/thumbnails/15ece10c38a.jpgThe complex relationship between maternal lipoproteins and preterm birth has been studied using NMR to measure lipoprotein particle levels in the blood of women at 24-29 weeks gestation. Read the rest at Spectroscopynow.com
nmrlearner General 0 10-02-2017 01:35 PM
[NMR paper] HDL particle number measured on the Vantera®, the first clinical NMR analyzer.
HDL particle number measured on the Vantera®, the first clinical NMR analyzer. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-elsevieroa.png http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles HDL particle number measured on the Vantera®, the first clinical NMR analyzer. Clin Biochem. 2015 Feb;48(3):148-55 Authors: Matyus SP, Braun PJ, Wolak-Dinsmore J, Saenger AK, Jeyarajah EJ, Shalaurova I, Warner SM,...
nmrlearner Journal club 0 10-09-2015 04:49 PM
[NMR paper] NMR measurement of LDL particle number using the Vantera Clinical Analyzer.
NMR measurement of LDL particle number using the Vantera Clinical Analyzer. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-elsevieroa.png Related Articles NMR measurement of LDL particle number using the Vantera Clinical Analyzer. Clin Biochem. 2014 Nov;47(16-17):203-10 Authors: Matyus SP, Braun PJ, Wolak-Dinsmore J, Jeyarajah EJ, Shalaurova I, Xu Y, Warner SM, Clement TS, Connelly MA, Fischer TJ Abstract BACKGROUND: The Vantera Clinical Analyzer was developed to enable...
nmrlearner Journal club 0 07-16-2015 11:21 AM
[NMR tweet] @manuelafern1 Do you mean NMR? Nuclear magnetic resonance spectroscopy a test used to assay lipoprotein particle numbers & sizes
@manuelafern1 Do you mean NMR? Nuclear magnetic resonance spectroscopy a test used to assay lipoprotein particle numbers & sizes Published by Drlipid (Thomas Dayspring) on 2013-04-08T23:42:33Z Source: Twitter
nmrlearner Twitter NMR 0 04-08-2013 11:43 PM
[NMR paper] Remodeling of HDL by phospholipid transfer protein: demonstration of particle fusion
Remodeling of HDL by phospholipid transfer protein: demonstration of particle fusion by 1H NMR spectroscopy. Related Articles Remodeling of HDL by phospholipid transfer protein: demonstration of particle fusion by 1H NMR spectroscopy. Biochem Biophys Res Commun. 1998 Aug 28;249(3):910-6 Authors: Korhonen A, Jauhiainen M, Ehnholm C, Kovanen PT, Ala-Korpela M There is evidence that phospholipid transfer protein (PLTP) can increase reverse cholesterol transport by inducing favorable subclass distribution in the high density lipoprotein (HDL)...
nmrlearner Journal club 0 11-17-2010 11:15 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2021, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 02:51 AM.


Map