BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 11-10-2017, 05:01 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,175
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default Observations using Phosphorus-31 nuclear magnetic resonance ((31)P-NMR) of structural changes in freeze-thawed hen egg yolk.

Observations using Phosphorus-31 nuclear magnetic resonance ((31)P-NMR) of structural changes in freeze-thawed hen egg yolk.

Observations using Phosphorus-31 nuclear magnetic resonance ((31)P-NMR) of structural changes in freeze-thawed hen egg yolk.

Food Chem. 2018 Apr 01;244:169-176

Authors: Wakamatsu H, Handa A, Chiba K

Abstract
Hen egg yolk (EY) has a complicated structure consisting of lipids and proteins, and its structure is deeply related with its functional properties. (31)P-NMR is an efficient technique to non-destructively detect the dynamic behaviour of phospholipids, the main component of bio-membranes. We determined conditions for measuring the (31)P NMR spectra of EY and identified the components. (31)P-NMR was used to detect phosvitin, inorganic phosphate, and lipoprotein as well as structural changes such as granule collapse and freeze-thaw denaturation as signal changes. Freeze-thaw denaturation generated a new denaturation peak. We separated aggregates of LDL from freeze-thawed plasma using centrifugation. TEM and (31)P-NMR observations revealed that the denaturation peak corresponded to LDL aggregates. The (31)P-NMR spectra suggested the formation of multiple forms of LDL aggregates in which the head groups of phospholipid molecules adopt a face-to-face orientation, similar to that observed following the flocculation of lipoproteins or in the lamellar-like structures of phospholipids.


PMID: 29120767 [PubMed - in process]



More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] Development of a low resolution (1)H NMR spectroscopic technique for the study of matrix mobility in fresh and freeze-thawed hen egg yolk.
Development of a low resolution (1)H NMR spectroscopic technique for the study of matrix mobility in fresh and freeze-thawed hen egg yolk. Development of a low resolution (1)H NMR spectroscopic technique for the study of matrix mobility in fresh and freeze-thawed hen egg yolk. Food Chem. 2016 Aug 1;204:159-66 Authors: Au C, Wang T, Acevedo NC Abstract
nmrlearner Journal club 0 03-19-2016 09:23 PM
[NMR tweet] NMR tweet Structural information on a membrane transport protein from nuclear magnetic resonance spectr...#eri... http://t.co/qRzS6b6nfk
NMR tweet Structural information on a membrane transport protein from nuclear magnetic resonance spectr...#eri... http://t.co/qRzS6b6nfk Published by bionmr (Bio NMR) on 2013-03-19T12:06:47Z Source: Twitter
nmrlearner Twitter NMR 0 03-19-2013 12:52 PM
[NMR tweet] Structural information on a membrane transport protein from nuclear magnetic resonance spectr...#eriba #umcg #yam http://t.co/cUgYdgNXBv
Structural information on a membrane transport protein from nuclear magnetic resonance spectr...#eriba #umcg #yam http://t.co/cUgYdgNXBv Published by digicmb (Guus van den Brekel) on 2013-03-16T18:31:35Z Source: Twitter
nmrlearner Twitter NMR 0 03-16-2013 06:48 PM
[NMR tweet] SSNMR: Solid-state nuclear magnetic resonance structural studies of proteins using paramagnetic probes http://t.co/xElS2wWv
SSNMR: Solid-state nuclear magnetic resonance structural studies of proteins using paramagnetic probes http://t.co/xElS2wWv Published by solidstateNMR (New SSNMR Papers) on 2012-03-13T19:35:34Z Source: Twitter
nmrlearner Twitter NMR 0 03-13-2012 09:56 PM
[NMR tweet] RT @sciencedaily: Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool for chemic... http://tinyurl.com/6lfyazv
RT @sciencedaily: Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool for chemic... http://tinyurl.com/6lfyazv Published by JEstebanTorres (JuliánEstebanTorres) on 2011-05-18T18:59:46Z Source: Twitter
nmrlearner Twitter NMR 0 05-18-2011 07:22 PM
[NMR tweet] RT @sciencedaily: Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool for chemic... http://tinyurl.com/6lfyazv
RT @sciencedaily: Nuclear magnetic resonance with no magnets: Nuclear magnetic resonance (NMR) is a powerful tool for chemic... http://tinyurl.com/6lfyazv Published by yoghayalestio (yogha yalestio) on 2011-05-18T18:32:05Z Source: Twitter
nmrlearner Twitter NMR 0 05-18-2011 07:22 PM
[NMR paper] Off-resonance rotating frame spin-lattice NMR relaxation studies of phosphorus metabo
Off-resonance rotating frame spin-lattice NMR relaxation studies of phosphorus metabolite rotational diffusion in bovine lens homogenates. Related Articles Off-resonance rotating frame spin-lattice NMR relaxation studies of phosphorus metabolite rotational diffusion in bovine lens homogenates. Biochemistry. 1990 Aug 21;29(33):7547-57 Authors: Caines GH, Schleich T, Morgan CF, Farnsworth PN The rotational diffusion behavior of phosphorus metabolites present in calf lens cortical and nuclear homogenates was investigated by the NMR technique of...
nmrlearner Journal club 0 08-21-2010 11:04 PM
Structural determination of biomolecular interfaces by nuclear magnetic resonance of
Abstract Protein interactions are important for understanding many molecular mechanisms underlying cellular processes. So far, interfaces between interacting proteins have been characterized by NMR spectroscopy mostly by using chemical shift perturbations and cross-saturation via intermolecular cross-relaxation. Although powerful, these techniques cannot provide unambiguous estimates of intermolecular distances between interacting proteins. Here, we present an alternative approach, called REDSPRINT (REDduced/Standard PRoton density INTerface identification), to map protein interfaces with...
nmrlearner Journal club 0 08-14-2010 04:19 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 09:57 AM.


Map