BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Journal club
Advanced Search
Home Forums Wiki NMR feeds Downloads Register Today's Posts



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 04-22-2015, 03:33 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 23,175
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default NMR-based lipidomic analysis of blood lipoproteins differentiates the progression of coronary heart disease.

NMR-based lipidomic analysis of blood lipoproteins differentiates the progression of coronary heart disease.

Related Articles NMR-based lipidomic analysis of blood lipoproteins differentiates the progression of coronary heart disease.

J Proteome Res. 2014 May 2;13(5):2585-98

Authors: Kostara CE, Papathanasiou A, Psychogios N, Cung MT, Elisaf MS, Goudevenos J, Bairaktari ET

Abstract
Abnormal lipid composition and metabolism of plasma lipoproteins play a crucial role in the pathogenesis of coronary heart disease (CHD). A (1)H NMR-based lipidomic approach was used to investigate the correlation of coronary artery stenosis with the atherogenic (non-HDL) and atheroprotective (HDL) lipid profiles in 99 patients with CHD of various stages of disease and compared with 60 patients with normal coronary arteries (NCA), all documented in coronary angiography. The pattern recognition models created from lipid profiles predicted the presence of CHD with a sensitivity of 87% and a specificity of 88% in the HDL model and with 90% and 89% in the non-HDL model, respectively. Patients with mild, moderate, and severe coronary artery stenosis were progressively differentiated from those with NCA in the non-HDL model with a statistically significant separation of severe stage from both mild and moderate. In the HDL model, the progressive differentiation of the disease stages was statistically significant only between patients with mild and severe coronary artery stenosis. The lipid constituents of lipoproteins that mainly characterized the initial stages and then the progression of the disease were the high levels of saturated fatty acids in lipids in both HDL and non-HDL particles, the low levels of HDL-phosphatidylcholine, HDL-sphingomyelin, and omega-3 fatty acids and linoleic acid in lipids in non-HDL particles. The conventional lipid marker, total cholesterol, found in low levels in HDL and in high levels in non-HDL, also contributed to the onset of the disease but with a much lower coefficient of significance. (1)H NMR-based lipidomic analysis of atherogenic and atheroprotective lipoproteins could contribute to the early evaluation of the onset of coronary artery disease and possibly to the establishment of an appropriate therapeutic option.


PMID: 24689886 [PubMed - indexed for MEDLINE]



More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
Sex hormone levels at midlife linked to heart disease risk in women - Medical Xpress
http://www.bionmr.com//t2.gstatic.com/images?q=tbn:ANd9GcRUDeMZIlFDDeEiaumKKf6zLdOwHQWqp_iwIiRsupZbiWE9o-dzT__1kfd5JmwWsQ0zdgzkIqg Medical Xpress <img alt="" height="1" width="1" /> Sex hormone levels at midlife linked to heart disease risk in women Medical Xpress Dr. El Khoudary and her colleagues used nuclear magnetic resonance spectroscopy to measure the size, distribution and concentration of lipoproteins that carry cholesterol in the blood. The Pitt Public Health team found that as estrogen levels fall ... Sex hormone levels at midlife linked to heart disease risk in women -...
nmrlearner Online News 0 06-29-2014 02:00 AM
New protein markers identified that could help understand heart disease better - Newstrack India
<img alt="" height="1" width="1" /> New protein markers identified that could help understand heart disease better Newstrack India Levels of GlycA and GlycB were determined from a blood test called nuclear magnetic resonance (NMR) spectroscopy, which was developed to determine the number of lipid particles contained in different cholesterol parameters. Like C-reactive protein, one ... and more &raquo; New protein markers identified that could help understand heart disease better - Newstrack India More...
nmrlearner Online News 0 04-02-2014 08:28 AM
New protein markers identified that could help understand heart disease better - ANINEWS
New protein markers identified that could help understand heart disease better - ANINEWS http://www.bionmr.com//t3.gstatic.com/images?q=tbn:ANd9GcQOl7eu5KCSgmKiU8vtG4wAdw_1tLa0OJYRSeIBAue5uOT8TdIrl2tvY7PvIYg-HYffggTseo9O ANINEWS <img alt="" height="1" width="1" /> New protein markers identified that could help understand heart disease better ANINEWS Levels of GlycA and GlycB were determined from a blood test called nuclear magnetic resonance (NMR) spectroscopy, which was developed to determine the number of lipid particles contained in different cholesterol parameters. Like C-reactive...
nmrlearner Online News 0 03-31-2014 11:13 PM
Guelph researchers are paving the way for new drugs for heart disease, eye and ... - Guelph Mercury
<img alt="" height="1" width="1" /> Guelph researchers are paving the way for new drugs for heart disease, eye and ... Guelph Mercury The team demonstrated a new way of looking at structures of cell membrane proteins using solid-state nuclear magnetic resonance. Their research appeared in the publication Nature Methods earlier this week. Researchers typically use X-rays to look at ... Guelph researchers are paving the way for new drugs for heart disease, eye and ... - Guelph Mercury More...
nmrlearner Online News 0 09-11-2013 09:15 PM
Research May Lead to New Drugs for Heart Disease, Other Ailments - Exchange Morning Post (press release)
<img alt="" height="1" width="1" /> Research May Lead to New Drugs for Heart Disease, Other Ailments Exchange Morning Post (press release) The U of G team has demonstrated a new way of looking at structures of cell membrane proteins using solid-state nuclear magnetic resonance (NMR) spectroscopy. NMR shows molecular structure by detecting magnetic spins and interactions of atomic nuclei ... Research May Lead to New Drugs for Heart Disease, Other Ailments - Exchange Morning Post (press release) More...
nmrlearner Online News 0 09-10-2013 08:44 PM
Research May Lead to New Drugs for Heart Disease, Other Ailments - HealthCanal.com
<img alt="" height="1" width="1" /> Research May Lead to New Drugs for Heart Disease, Other Ailments HealthCanal.com The U of G team has demonstrated a new way of looking at structures of cell membrane proteins using solid-state nuclear magnetic resonance (NMR) spectroscopy. NMR shows molecular structure by detecting magnetic spins and interactions of atomic nuclei ... and more &raquo; Research May Lead to New Drugs for Heart Disease, Other Ailments - HealthCanal.com More...
nmrlearner Online News 0 09-10-2013 08:00 AM
[NMR paper] 31P-NMR analysis of congestive heart failure in the SHHF/Mcc-facp rat heart.
31P-NMR analysis of congestive heart failure in the SHHF/Mcc-facp rat heart. Related Articles 31P-NMR analysis of congestive heart failure in the SHHF/Mcc-facp rat heart. J Mol Cell Cardiol. 1998 Feb;30(2):235-41 Authors: Michael O'Donnell J, Narayan P, Bailey MQ, Abduljalil AM, Altschuld RA, McCune SA, Robitaille PM 31P-NMR was used to monitor myocardial bioenergetics in compensated and failing SHHF/MCC-fa(cp) (SHF) rat hearts. The SHHF/Mcc-fa(cp) (spontaneous hypertension and heart failure) rat is a relatively new genetic model in which...
nmrlearner Journal club 0 11-17-2010 11:06 PM
[NMR paper] 1H NMR-based absolute quantitation of human lipoproteins and their lipid contents dir
1H NMR-based absolute quantitation of human lipoproteins and their lipid contents directly from plasma. Related Articles 1H NMR-based absolute quantitation of human lipoproteins and their lipid contents directly from plasma. J Lipid Res. 1994 Dec;35(12):2292-304 Authors: Ala-Korpela M, Korhonen A, Keisala J, Hörkkö S, Korpi P, Ingman LP, Jokisaari J, Savolainen MJ, Kesäniemi YA A new method is presented for absolute quantitation of lipid and protein contents of human lipoproteins directly from plasma. The method enables complete lipoprotein...
nmrlearner Journal club 0 08-22-2010 03:29 AM



Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 04:37 AM.


Map