Assessment of chemical exchange in tryptophanâ??albumin solution through 19 F multicomponent transverse relaxation dispersion analysis
 

Assessment of chemical exchange in tryptophanâ??albumin solution through 19 F multicomponent transverse relaxation dispersion analysis

Abstract

A number of NMR methods possess the capability of probing chemical exchange dynamics in solution. However, certain drawbacks limit the applications of these NMR approaches, particularly, to a complex system. Here, we propose a procedure that integrates the regularized nonnegative least squares (NNLS) analysis of multiexponential T2 relaxation into Carrâ??Purcellâ??Meiboomâ??Gill (CPMG) relaxation dispersion experiments to probe chemical exchange in a multicompartmental system. The proposed procedure was validated through analysis of 19F T2 relaxation data of 6-fluoro-DL-tryptophan in a two-compartment solution with and without bovine serum albumin. Given the regularized NNLS analysis of a T2 relaxation curve acquired, for example, at the CPMG frequency Ï? CPMG Â*=Â*125, the nature of two distinct peaks in the associated T2 distribution spectrum indicated 6-fluoro-DL-tryptophan either retaining the free state, with geometric mean */multiplicative standard deviationÂ*(MSD) =Â*1851.2Â*ms */1.51, or undergoing free/albumin-bound interconversion, with geometric mean */MSDÂ*=Â*236.8Â*ms */1.54, in the two-compartment system. Quantities of the individual tryptophan species were accurately reflected by the associated T2 peak areas, with an interconversion state-to-free state ratio of 0.45Â*±Â*0.11. Furthermore, the CPMG relaxation dispersion analysis estimated the exchange rate between the free and albumin-bound states in this fluorinated tryptophan analog and the corresponding dissociation constant of the fluorinated tryptophanâ??albumin complex in the chemical-exchanging, two-compartment system.



Source: Journal of Biomolecular NMR