[ASAP] Protein Farnesyltransferase Catalyzes Unanticipated Farnesylation and Geranylgeranylation of Shortened Target Sequences

		BioNMR > Educational resources > Journal club
[ASAP] Protein Farnesyltransferase Catalyzes Unanticipated Farnesylation and Geranylgeranylation of Shortened Target Sequences

Webservers

NMR processing:

MDD

NMR assignment:

Backbone:

Side-chains:

NOEs:

Structure from NMR restraints:

Ab initio:

Fragment-based:

Rosetta-NMR (Robetta)

Template-based:

GeNMR

I-TASSER

Refinement:

Amber

Structure from chemical shifts:

Fragment-based:

Homology-based:

Torsion angles from chemical shifts:

Preditor

TALOS

Promega- Proline

Secondary structure from chemical shifts:

CSI (via RCI server)

TALOS

MICS caps, β-turns

d2D

PECAN

Flexibility from chemical shifts:

RCI

Interactions from chemical shifts:

HADDOCK

Chemical shifts re-referencing:

NMR model quality:

NOEs, other restraints:

Chemical shifts:

RDCs:

Pseudocontact shifts:

Protein geomtery:

SAVES2 or SAVES4

Quality Control Check

NMR spectrum prediction:

FANDAS

MestReS

V-NMR

Flexibility from structure:

Backbone S2

Methyl S2

B-factor

Molecular dynamics:

Gromacs

Amber

Antechamber

Chemical shifts prediction:

From structure:

Shiftx2

Sparta+

Camshift

CH3shift- Methyl

ArShift- Aromatic

ShiftS

Proshift

PPM

CheShift-2- Cα

From sequence:

Shifty

Camcoil

Poulsen_rc_CS

Disordered proteins:

MAXOCC

Format conversion & validation:

CCPN

From NMR-STAR 3.1

Validate NMR-STAR 3.1

NMR sample preparation:

Protein disorder:

DisMeta

Protein solubility:

Isotope labeling:

Solid-state NMR:

View First Unread

Thread Tools

Search this Thread

Rate Thread

Display Modes

03-16-2020, 04:59 PM

nmrlearner

Senior Member

Join Date: Jan 2005

Posts: 23,184

Points: 193,617, Level: 100

Level up: 0%, 0 Points needed

Activity: 50.7%

Last Achievements

Award-Showcase

NMR Credits: 0

NMR Points: 193,617

Downloads: 0

Uploads: 0

[ASAP] Protein Farnesyltransferase Catalyzes Unanticipated Farnesylation and Geranylgeranylation of Shortened Target Sequences

[ASAP] Protein Farnesyltransferase Catalyzes Unanticipated Farnesylation and Geranylgeranylation of Shortened Target Sequences

Biochemistry
DOI: 10.1021/acs.biochem.0c00081

More...

Did you find this post helpful?

Similar Threads
Thread	Thread Starter	Forum	Replies	Last Post
Predicting Protein Function from DNA Sequences - News-Medical.net Predicting Protein Function from DNA Sequences - News-Medical.net Predicting Protein Function from DNA Sequences News-Medical.netThis article describes the ways in which protein function can be determined from DNA sequences or mRNA. Read here	nmrlearner	Online News	0	04-17-2019 01:41 PM
[ASAP] Target Engagement and Binding Mode of an Antituberculosis Drug to Its Bacterial Target Deciphered in Whole Living Cells by NMR Target Engagement and Binding Mode of an Antituberculosis Drug to Its Bacterial Target Deciphered in Whole Living Cells by NMR https://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.8b00975/20190103/images/medium/bi-2018-00975t_0006.gif Biochemistry DOI: 10.1021/acs.biochem.8b00975 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/J0ajkYKpz7s More...	nmrlearner	Journal club	0	01-07-2019 05:49 AM
Crystal Structures of SgcE6 and SgcC, the Two-ComponentMonooxygenase That Catalyzes Hydroxylation of a Carrier Protein-TetheredSubstrate during the Biosynthesis of the Enediyne Antitumor AntibioticC-1027 in Streptomyces globisporus Crystal Structures of SgcE6 and SgcC, the Two-ComponentMonooxygenase That Catalyzes Hydroxylation of a Carrier Protein-TetheredSubstrate during the Biosynthesis of the Enediyne Antitumor AntibioticC-1027 in Streptomyces globisporus http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/bichaw/0/bichaw.ahead-of-print/acs.biochem.6b00713/20160901/images/medium/bi-2016-00713e_0008.gif Biochemistry DOI: 10.1021/acs.biochem.6b00713 http://feeds.feedburner.com/~ff/acs/bichaw?d=yIl2AUoC8zA http://feeds.feedburner.com/~r/acs/bichaw/~4/TBGA-dUVhiQ More...	nmrlearner	Journal club	0	09-02-2016 09:36 AM
[NMR images] density prior to induction of toxic target protein Soluble protein ... http://biosilta.com/wp-content/uploads/2013/04/img_chart_celldensity_uk_nmr.jpg 22/04/2014 3:22:09 AM GMT density prior to induction of toxic target protein Soluble protein ... More...	nmrlearner	NMR pictures	0	04-22-2014 03:21 AM
[NMR paper] Sequential HNCACB and CBCANH protein NMR pulse sequences. Sequential HNCACB and CBCANH protein NMR pulse sequences. Related Articles Sequential HNCACB and CBCANH protein NMR pulse sequences. J Magn Reson. 2001 Aug;151(2):328-31 Authors: Meissner A, Sørensen OW The pulse sequences HNCACB and CBCANH correlating side chain C(beta) resonances with amide resonances in the protein backbone do not distinguish between inter- and intraresidue correlations. The new pulse sequences sequential HNCACB and sequential CBCANH make this distinction by suppressing coherence transfer between 13C(alpha) and 15N via the...	nmrlearner	Journal club	0	11-19-2010 08:44 PM
[NMR paper] 1H NMR conformational study on N-terminal nonapeptide sequences of HIV-1 Tat protein: 1H NMR conformational study on N-terminal nonapeptide sequences of HIV-1 Tat protein: a contribution to structure-activity relationships. Related Articles 1H NMR conformational study on N-terminal nonapeptide sequences of HIV-1 Tat protein: a contribution to structure-activity relationships. J Pept Sci. 1998 Sep;4(6):400-10 Authors: Mrestani-Klaus C, Fengler A, Brandt W, Faust J, Wrenger S, Reinhold D, Ansorge S, Neubert K On the basis of our recent results, the N-terminal sequence of HIV-1 Tat protein as a natural competitive inhibitor of...	nmrlearner	Journal club	0	11-17-2010 11:15 PM
[NMR paper] Tubulin-tyrosine ligase catalyzes covalent binding of 3-fluoro-tyrosine to tubulin: k Tubulin-tyrosine ligase catalyzes covalent binding of 3-fluoro-tyrosine to tubulin: kinetic and NMR studies. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--linkinghub.elsevier.com-ihub-images-PubMedLink.gif Related Articles Tubulin-tyrosine ligase catalyzes covalent binding of 3-fluoro-tyrosine to tubulin: kinetic and NMR studies. FEBS Lett. 1995 Oct 30;374(2):165-8 Authors: Monasterio O, Nova E, LÃ³pez-Brauet A, Lagos R The use of 3-fluoro-tyrosine as an alternative substrate for the enzyme tubulin:tyrosine ligase which catalyzes the...	nmrlearner	Journal club	0	08-22-2010 03:50 AM
[Question from NMRWiki Q&A forum] 2D pulse sequences for NMR of protein/peptide complexes? 2D pulse sequences for NMR of protein/peptide complexes? Hello, I am looking for some 15N/13C-filtered 2D NOESY and 2D TOCSY pulse sequences to run on a Varian 600. Does anyone have any ideas where I would get some tried and tested pulse sequence input files? Check if somebody has answered this question on NMRWiki QA forum	nmrlearner	News from other NMR forums	0	08-22-2010 02:30 AM

« Previous Thread | Next Thread »

Posting Rules
You may not post new threads You may not post replies You may not post attachments You may not edit your posts BB code is On Smilies are On [IMG] code is On HTML code is On Trackbacks are Off Pingbacks are Off Refbacks are Off