BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > General
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 03-24-2019, 10:41 PM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 19,204
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default NMR solves retroviral mystery: Avian Sarcoma Virus

NMR solves retroviral mystery: Avian Sarcoma Virus

Nuclear magnetic resonance (NMR) spectroscopy has been used to reveal molecular details of a key step in retroviral growth within the cell. The study shows how the matrix domain of the avian sarcoma virus, or ASV, Gag protein binds to certain phospholipids, which are critical to binding to the plasma membrane of a cell for viral replication.

Read the rest at Spectroscopynow.com
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[NMR paper] A Combined NMR-Computational Study of the Interaction between Influenza Virus Hemagglutinin and Sialic Derivatives from Human and Avian Receptors on the Surface of Transfected Cells.
A Combined NMR-Computational Study of the Interaction between Influenza Virus Hemagglutinin and Sialic Derivatives from Human and Avian Receptors on the Surface of Transfected Cells. Related Articles A Combined NMR-Computational Study of the Interaction between Influenza Virus Hemagglutinin and Sialic Derivatives from Human and Avian Receptors on the Surface of Transfected Cells. Int J Mol Sci. 2018 Apr 24;19(5): Authors: Vasile F, Panigada M, Siccardi A, Potenza D, Tiana G Abstract The development of small-molecule inhibitors of...
nmrlearner Journal club 0 04-27-2018 10:26 PM
[NMR paper] Targeting a dark excited state of HIV-1 nucleocapsid by anti-retroviral thioesters revealed by NMR.
Targeting a dark excited state of HIV-1 nucleocapsid by anti-retroviral thioesters revealed by NMR. http://www.bionmr.com//www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--media.wiley.com-assets-7315-19-Wiley_FullText_120x30_orange.png Related Articles Targeting a dark excited state of HIV-1 nucleocapsid by anti-retroviral thioesters revealed by NMR. Angew Chem Int Ed Engl. 2018 Jan 18;: Authors: Deshmukh L, Tugarinov V, Appella DH, Clore GM Abstract HIV-1 nucleocapsid (NCp7) is a two Cys2HisCys zinc knuckle (N-Zn and C-Zn)...
nmrlearner Journal club 0 01-19-2018 08:57 PM
[NMR paper] Probing the Residual Structure in Avian Prion Hexarepeats by CD, NMR and MD Techniques.
Probing the Residual Structure in Avian Prion Hexarepeats by CD, NMR and MD Techniques. Probing the Residual Structure in Avian Prion Hexarepeats by CD, NMR and MD Techniques. Molecules. 2013;18(9):11467-84 Authors: Russo L, Raiola L, Campitiello MA, Magrý A, Fattorusso R, Malgieri G, Pappalardo G, La Mendola D, Isernia C Abstract Many proteins perform essential biological functions by means of regions that lacking specific organized structure exist as an ensemble of interconverting transient conformers. The characterization of such...
nmrlearner Journal club 0 09-19-2013 02:19 PM
Gamers Help Solve AIDS Protein Mystery - IEEE Spectrum
<img alt="" height="1" width="1" /> Gamers Help Solve AIDS Protein Mystery IEEE Spectrum Even with advanced technologies, such as nuclear magnetic resonance spectroscopy, deciphering protein structures can be difficult. A few years ago, researchers at the University of Washington decided to enlist the help of citizen scientists by turning ... and more &raquo; Gamers Help Solve AIDS Protein Mystery - IEEE Spectrum More...
nmrlearner Online News 0 09-22-2011 05:37 AM
[NMR paper] NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src.
NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src. Related Articles NMR assignment of the apo and peptide-bound SH2 domain from the Rous sarcoma viral protein Src. J Biomol NMR. 2005 Aug;32(4):339 Authors: Taylor JD, Fawaz RR, Ababou A, Williams MA, Ladbury JE
nmrlearner Journal club 0 12-01-2010 06:56 PM
Structure of a Conserved Retroviral RNA Packaging Element by NMR Spectroscopy and Cry
Structure of a Conserved Retroviral RNA Packaging Element by NMR Spectroscopy and Cryo-Electron Tomography. Related Articles Structure of a Conserved Retroviral RNA Packaging Element by NMR Spectroscopy and Cryo-Electron Tomography. J Mol Biol. 2010 Oct 6; Authors: Miyazaki Y, Irobalieva RN, Tolbert B, Smalls-Mantey A, Iyalla K, Loeliger K, D'Souza V, Khant H, Schmid MF, Garcia E, Telesnitsky A, Chiu W, Summers MF The 5'-untranslated regions (5'-UTRs) of all gammaretroviruses contain a conserved "double hairpin motif" (?(CD)) that is required for...
nmrlearner Journal club 0 10-12-2010 02:52 PM
More than a third of our proteins are still a mystery for scientists - HealthCanal.co
More than a third of our proteins are still a mystery for scientists - HealthCanal.com <img alt="" height="1" width="1" /> More than a third of our proteins are still a mystery for scientists HealthCanal.com Several tools to study the structure of these proteins are already available, such as Nuclear Magnetic Resonance and Small-angle X-ray Scattering (SAXS); ... Read More
nmrlearner Online News 0 10-02-2010 12:16 AM
[NMR paper] Interaction of retroviral nucleocapsid proteins with transfer RNAPhe: a lead ribozyme
Interaction of retroviral nucleocapsid proteins with transfer RNAPhe: a lead ribozyme and 1H NMR study. http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--highwire.stanford.edu-icons-externalservices-pubmed-custom-oxfordjournals_final_free.gif http://www.ncbi.nlm.nih.gov/corehtml/query/egifs/http:--www.pubmedcentral.nih.gov-corehtml-pmc-pmcgifs-pubmed-pmc.gif Related Articles Interaction of retroviral nucleocapsid proteins with transfer RNAPhe: a lead ribozyme and 1H NMR study. Nucleic Acids Res. 1996 Sep 15;24(18):3568-75 Authors: Khan R, Chang HO,...
nmrlearner Journal club 0 08-22-2010 02:20 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2019, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 12:52 AM.


Map