BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > General
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rate Thread Display Modes
  #1  
Unread 07-09-2013, 02:41 AM
nmrlearner's Avatar
Senior Member
 
Join Date: Jan 2005
Posts: 17,578
Points: 193,617, Level: 100
Points: 193,617, Level: 100 Points: 193,617, Level: 100 Points: 193,617, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 50.7%
Activity: 50.7% Activity: 50.7% Activity: 50.7%
Last Achievements
Award-Showcase
NMR Credits: 0
NMR Points: 193,617
Downloads: 0
Uploads: 0
Default dosy for a protein

dosy for a protein

this is the 2dimensional dosy experiment

More...
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[Question from NMRWiki Q&A forum] DOSY deep signal distortions
DOSY deep signal distortions Hi heveryone,I'm trying to run some DOSY experiments, but the resulting spectra are VERY distorted, and this is not just a problem of phase. The strange thing is that these distortions didn't appear as long as a few days ago... Have you got any suggestion?Further details: The spectrometer is a Bruker 400MHz, and the sequence is the dstegp3s Check if somebody has answered this question on NMRWiki QA forum
nmrlearner News from other NMR forums 0 06-26-2013 09:39 AM
[Question from NMRWiki Q&A forum] How to process DOSY data by using MestReNova?
How to process DOSY data by using MestReNova? This is my first time in doing DOSY experiment. i got the data but dont know how to process it. Check if somebody has answered this question on NMRWiki QA forum
nmrlearner News from other NMR forums 0 06-12-2012 10:36 AM
[Question from NMRWiki Q&A forum] Odd distortion in HOD peak in 1D DOSY (stebpgp1s)
Odd distortion in HOD peak in 1D DOSY (stebpgp1s) I have a small distortion in the HOD peak in my 1D DOSY spectra. However, it only occurs for the HOD signal and no other peaks in the spectrum. Occasionally, I am able to "fix" this by not spinning the sample (though not always). Any help would be appreciated. Check if somebody has answered this question on NMRWiki QA forum
nmrlearner News from other NMR forums 0 12-02-2011 02:31 PM
[Question from NMRWiki Q&A forum] distorted DOSY ID
distorted DOSY ID Why are some Dosy spectra 1d so distorted?. How can this be overcome? Check if somebody has answered this question on NMRWiki QA forum
nmrlearner News from other NMR forums 0 01-07-2011 12:10 PM
[Question from NMRWiki Q&A forum] How many peaks should be in DOSY spectrum of D2O sample?
How many peaks should be in DOSY spectrum of D2O sample? Hello, I've recorded a DOSY data set and processed with Bayesian DOSY transform. There seem to be at least two peaks in the processed spectrum. Is the second one an artifact? In theory there might be a signal of H2O along with HDO, but wouldn't exchange of deuterium be much faster than the experiment time scale? Thanks.
nmrlearner News from other NMR forums 0 08-28-2010 10:31 AM
[Question from NMRWiki Q&A forum] How to process DOSY data in Mnova?
How to process DOSY data in Mnova? Hi we have a DOSY dataset aquired using Doneshot.c sequence on a varian instrument. Will MNOVA process the dataset? Thanks!
nmrlearner News from other NMR forums 0 08-25-2010 04:37 AM
[NMR software blog] Installing the DOSY toolbox on a Mac
Installing the DOSY toolbox on a Mac The DOSY toolbox is an open source program written by Dr. Mathias Nilsson that runs on Windows, Linux, Mac and on any other platform covered by MATLAB. I am going to review it next week, while today I am giving a few practical tips that I prefer to leave out of the review, for the sake of readability and tidiness. I know that 14% of my readers have a Mac, and I have verified that the original installation instructions of the toolbox are inaccurate and unclear (for the average Mac user at least), so today I will simply explain how you can install the...
nmrlearner News from NMR blogs 0 08-21-2010 06:29 PM
[NMR software blog] Qr-dosy
QR-DOSY At the beginning of the month we saw that there are cases where the diffusion coefficients can be measured with the same mathematical tools used to measure relaxation. We have seen DOSY spectra of pure compounds where each signal decays as a pure exponential. Even a mixture can behave in the same way, if the signals don't overlap. In summary, calculating the diffusion coefficients is often easy. What I was curious to discover was: is it possible to recalculate the components of a mixture if the diffusion coeffients are known? From a pure mathematical point of view the answer was...
nmrlearner News from NMR blogs 0 08-21-2010 06:29 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2017, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 06:56 AM.


Map