BioNMR
NMR aggregator & online community since 2003
BioNMR    
Learn or help to learn NMR - get free NMR books!
 

Go Back   BioNMR > Educational resources > Conferences
Advanced Search



Jobs Groups Conferences Literature Pulse sequences Software forums Programs Sample preps Web resources BioNMR issues


Webservers
NMR processing:
MDD
NMR assignment:
Backbone:
Autoassign
MARS
UNIO Match
PINE
Side-chains:
UNIO ATNOS-Ascan
NOEs:
UNIO ATNOS-Candid
UNIO Candid
ASDP
Structure from NMR restraints:
Ab initio:
GeNMR
Cyana
XPLOR-NIH
ASDP
UNIO ATNOS-Candid
UNIO Candid
Fragment-based:
BMRB CS-Rosetta
Rosetta-NMR (Robetta)
Template-based:
GeNMR
I-TASSER
Refinement:
Amber
Structure from chemical shifts:
Fragment-based:
WeNMR CS-Rosetta
BMRB CS-Rosetta
Homology-based:
CS23D
Simshift
Torsion angles from chemical shifts:
Preditor
TALOS
Promega- Proline
Secondary structure from chemical shifts:
CSI (via RCI server)
TALOS
MICS caps, β-turns
d2D
PECAN
Flexibility from chemical shifts:
RCI
Interactions from chemical shifts:
HADDOCK
Chemical shifts re-referencing:
Shiftcor
UNIO Shiftinspector
LACS
CheckShift
RefDB
NMR model quality:
NOEs, other restraints:
PROSESS
PSVS
RPF scores
iCing
Chemical shifts:
PROSESS
CheShift2
Vasco
iCing
RDCs:
DC
Anisofit
Pseudocontact shifts:
Anisofit
Protein geomtery:
Resolution-by-Proxy
PROSESS
What-If
iCing
PSVS
MolProbity
SAVES2 or SAVES4
Vadar
Prosa
ProQ
MetaMQAPII
PSQS
Eval123D
STAN
Ramachandran Plot
Rampage
ERRAT
Verify_3D
Harmony
Quality Control Check
NMR spectrum prediction:
FANDAS
MestReS
V-NMR
Flexibility from structure:
Backbone S2
Methyl S2
B-factor
Molecular dynamics:
Gromacs
Amber
Antechamber
Chemical shifts prediction:
From structure:
Shiftx2
Sparta+
Camshift
CH3shift- Methyl
ArShift- Aromatic
ShiftS
Proshift
PPM
CheShift-2- Cα
From sequence:
Shifty
Camcoil
Poulsen_rc_CS
Disordered proteins:
MAXOCC
Format conversion & validation:
CCPN
From NMR-STAR 3.1
Validate NMR-STAR 3.1
NMR sample preparation:
Protein disorder:
DisMeta
Protein solubility:
camLILA
ccSOL
Camfold
camGroEL
Zyggregator
Isotope labeling:
UPLABEL
Solid-state NMR:
sedNMR


Reply
Thread Tools Search this Thread Rating: Thread Rating: 1 votes, 5.00 average. Display Modes
  #1  
Unread 02-26-2012, 10:22 PM
markber's Avatar
Administrator
 
Join Date: Oct 2008
Posts: 1,538
Points: 38,561, Level: 100
Points: 38,561, Level: 100 Points: 38,561, Level: 100 Points: 38,561, Level: 100
Level up: 0%, 0 Points needed
Level up: 0% Level up: 0% Level up: 0%
Activity: 0%
Activity: 0% Activity: 0% Activity: 0%
Last Achievements
NMR Credits: 1,550
NMR Points: 38,561
Downloads: 17
Uploads: 4
Default Three-days HADDOCK workshop in Vilnius

LINK

Description

HADDOCK is an information-driven docking program developed at Utrecht University, which is widely used in the structural biology community and has demonstrated a strong performance in the blind docking competition CAPRI.

The workshop will be given by Prof. Alexandre Bonvin with a number of his group members. It will consist of lectures in the morning and hands-on sessions on computers in the afternoon.

Sign ups are limited to 20 people. For these, experience with Linux is a requisite. The workshop will cover various aspects of the modelling of biomolecular complexes including:

Protein-Protein Docking
Multi-body Docking
Protein-DNA Docking
Protein-Ligand Docking
Further details on the program will be sent to the participants via e-mail.

Lecturers and trainers

Alexandre Bonvin
Marc van Dijk
Ezgi Karaca
Adrien Melquiond
Location

The workshop will be held in Vilnius, Lithuania.

Fees

Fees for the workshop are:

€600 for participants from non-profit institutes
€1200 for participants from for-profit institutes
Discounts of up to 50% are available for the course fees. Fees include course materials, social program, refreshments and the social program.

Accommodation

Fees do not include accommodation. Accommodation can be arranged by participants themselves, or by contacting Baltic Breeze Travel for special offers at info@baltic-breeze.com.
Reply With Quote


Did you find this post helpful? Yes | No

Reply
Similar Threads
Thread Thread Starter Forum Replies Last Post
[KPWU blog] Things must be changed before Protein-RNA docking using Haddock
Things must be changed before Protein-RNA docking using Haddock Just a note for RNA-protein docking using Haddock 2.1 System: Mac OS 10.6.8, CNS 1.3, Haddock 2.1 1. RNA (or DNA) nomenclature in CNS is not same as the names in PDB. e.g. ACU in PDB = ADE CYT URI in CNS The “nucleic acid builder” developed in David *Case group can generate template structure http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=655&subd=kpwu&ref=&feed=1 Go to KPWU blog to read complete post.
nmrlearner News from NMR blogs 0 02-23-2012 07:38 AM
[KPWU blog] HADDOCK on iMac and a quick benchmark
HADDOCK on iMac and a quick benchmark Recently I requested a copy of HADDOCK from Dr. Alexandre Bonvin in order to generate some docked dimers for my colleagues. They are working on some dimeric proteins but they have no idea how to obtain the dimeric conformation from homologous known structures. I spent few days reading the threads in the HADDOCK discussion group http://stats.wordpress.com/b.gif?host=kpwu.wordpress.com&blog=76132&post=285&subd=kpwu&ref=&feed=1 Go to KPWU blog to read complete post.
nmrlearner News from NMR blogs 0 03-29-2011 09:01 PM
[NMR900 blog] SMARTER 2 Workshop
SMARTER 2 Workshop Dear Colleagues, We cordially invite you to the Second SMARTER Crystallography Workshop (Structure elucidation by coMbining mAgnetic Resonance, compuTation modEling and diffRactions), which will be held on 23-27 May 2011 at the University of Aveiro, Portugal. The aim of this workshop is to bring together specialists from the different areas of materials science, such as materials chemists and processing engineers, diffraction and spectroscopy scientists, and computational structuralists, that may contribute to the development of a common language for a SMARTER...
nmrlearner News from NMR blogs 0 03-04-2011 02:12 AM
SMARTER 2 Workshop
SMARTER 2 Workshop Dear colleagues, We cordially invite you to the 2nd SMARTER Workshop, which will be held on May 23-27, 2011 at the University of Aveiro, Portugal. The aim of this workshop is to bring together specialists from the different areas of materials science, combining several approaches such as Computational Modelling, Diffraction Techniques and NMR Crystallographies. Read more about SMARTER 2 Workshop at http://smarter.web.ua.pt/
nmrlearner Conferences 0 01-28-2011 04:52 AM
[CNS Yahoo group] Ten days left to apply, and many seats available, for RapiData 2011,
Ten days left to apply, and many seats available, for RapiData 2011, This may be the last reminder that we are offering RapiData 2011, the thirteenth offering of our popular course: Rapid Data Collection and Structure Solving at More...
nmrlearner News from other NMR forums 0 01-21-2011 03:31 AM
Intensive 2-Day NMR Workshop in NMR
Intensive 2-Day NMR Workshop in NMR Online registration is now open. Please follow this link Photos from the successful 2010 workshop can be found here Director : Dr. Vasudevan Ramesh Keywords: NMR Spectral Analysis and Interpretation, Computer-Aided Training, Problem-Based Learning. Significance: Nuclear Magnetic Resonance (NMR) spectroscopy is a powerful, continually evolving analytical technique with wide applications in chemical, biological, pharmaceutical and medical sciences. This...
nmrlearner Conferences 0 10-05-2010 02:04 AM
[BMNRC community] HADDOCK Software web portal
HADDOCK Software web portal http://haddock.chem.uu.nl/index.html Go to BMNRC community to find more info about this topic.
nmrlearner News from other NMR forums 0 09-02-2010 04:59 AM
[Stan NMR blog] Reminiscences of the Early Days of NMR at Stanford
Reminiscences of the Early Days of NMR at Stanford A fascinating 1967 document written by Warren G.Proctor. More...
nmrlearner News from NMR blogs 0 08-21-2010 06:14 PM


Thread Tools Search this Thread
Search this Thread:

Advanced Search
Display Modes Rate This Thread
Rate This Thread:

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is On
Trackbacks are Off
Pingbacks are Off
Refbacks are Off



BioNMR advertisements to pay for website hosting and domain registration. Nobody does it for us.



Powered by vBulletin® Version 3.7.3
Copyright ©2000 - 2024, Jelsoft Enterprises Ltd.
Copyright, BioNMR.com, 2003-2013
Search Engine Friendly URLs by vBSEO 3.6.0

All times are GMT. The time now is 05:02 AM.


Map